Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | ERO09_RS02980 | Genome accession | NZ_CP035368 |
| Coordinates | 616547..617065 (+) | Length | 172 a.a. |
| NCBI ID | WP_128787085.1 | Uniprot ID | - |
| Organism | Haemophilus parainfluenzae strain LC_1315_18 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 611547..622065
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ERO09_RS02960 (ERO09_02950) | thiP | 612183..613787 (+) | 1605 | WP_128787082.1 | thiamine/thiamine pyrophosphate ABC transporter permease ThiP | - |
| ERO09_RS02965 (ERO09_02955) | thiQ | 613780..614409 (+) | 630 | WP_128787083.1 | thiamine ABC transporter ATP-binding protein | - |
| ERO09_RS02970 (ERO09_02960) | bioB | 614484..615500 (+) | 1017 | WP_049355387.1 | biotin synthase BioB | - |
| ERO09_RS02975 (ERO09_02965) | suhB | 615546..616346 (-) | 801 | WP_128787084.1 | inositol-1-monophosphatase | - |
| ERO09_RS02980 (ERO09_02970) | comN | 616547..617065 (+) | 519 | WP_128787085.1 | prepilin-type cleavage/methylation domain-containing protein | Machinery gene |
| ERO09_RS02985 (ERO09_02975) | comO | 617053..617778 (+) | 726 | WP_172622001.1 | type II secretion system protein J | Machinery gene |
| ERO09_RS02990 (ERO09_02980) | comP | 617775..618461 (+) | 687 | WP_172622002.1 | DUF2572 family protein | Machinery gene |
| ERO09_RS02995 (ERO09_02985) | comQ | 618475..618741 (+) | 267 | WP_049364346.1 | DUF5374 domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 20158.31 Da Isoelectric Point: 8.9326
>NTDB_id=339348 ERO09_RS02980 WP_128787085.1 616547..617065(+) (comN) [Haemophilus parainfluenzae strain LC_1315_18]
MYKGITLLETLIVLFILSLTLAFALPKWQKNDPKYFLEKEQQRLYFFLRNIQARAENSSAIWFILANQDRTNQRWCITAQ
VKSDHFCDCFHPHNCPKNLYAHFYYPYFEGKTMLIGPKLYPSEVAVKFNGARNTMETNCFMLQAEEHRTLFSFFNVGSIK
LKSDQAASACTR
MYKGITLLETLIVLFILSLTLAFALPKWQKNDPKYFLEKEQQRLYFFLRNIQARAENSSAIWFILANQDRTNQRWCITAQ
VKSDHFCDCFHPHNCPKNLYAHFYYPYFEGKTMLIGPKLYPSEVAVKFNGARNTMETNCFMLQAEEHRTLFSFFNVGSIK
LKSDQAASACTR
Nucleotide
Download Length: 519 bp
>NTDB_id=339348 ERO09_RS02980 WP_128787085.1 616547..617065(+) (comN) [Haemophilus parainfluenzae strain LC_1315_18]
ATGTATAAAGGGATAACCTTATTAGAAACCTTGATTGTATTATTTATTTTAAGCTTAACGTTAGCGTTTGCATTGCCTAA
ATGGCAGAAAAATGATCCCAAATATTTTCTCGAAAAAGAGCAACAACGGCTTTATTTTTTCTTACGTAATATTCAAGCGA
GGGCGGAAAACTCATCGGCGATTTGGTTTATTTTGGCCAATCAAGATAGGACAAATCAACGTTGGTGTATCACAGCTCAA
GTAAAAAGCGATCATTTTTGTGATTGTTTTCATCCCCATAATTGTCCTAAAAACCTTTATGCGCATTTTTACTATCCTTA
TTTTGAAGGAAAAACGATGCTGATAGGCCCTAAATTATATCCGTCAGAAGTGGCGGTGAAATTTAATGGGGCCAGAAATA
CCATGGAAACAAATTGTTTTATGTTACAAGCTGAAGAGCATCGAACATTGTTCTCTTTTTTCAATGTTGGCAGTATTAAA
TTAAAGTCTGATCAAGCGGCGAGTGCATGTACAAGATGA
ATGTATAAAGGGATAACCTTATTAGAAACCTTGATTGTATTATTTATTTTAAGCTTAACGTTAGCGTTTGCATTGCCTAA
ATGGCAGAAAAATGATCCCAAATATTTTCTCGAAAAAGAGCAACAACGGCTTTATTTTTTCTTACGTAATATTCAAGCGA
GGGCGGAAAACTCATCGGCGATTTGGTTTATTTTGGCCAATCAAGATAGGACAAATCAACGTTGGTGTATCACAGCTCAA
GTAAAAAGCGATCATTTTTGTGATTGTTTTCATCCCCATAATTGTCCTAAAAACCTTTATGCGCATTTTTACTATCCTTA
TTTTGAAGGAAAAACGATGCTGATAGGCCCTAAATTATATCCGTCAGAAGTGGCGGTGAAATTTAATGGGGCCAGAAATA
CCATGGAAACAAATTGTTTTATGTTACAAGCTGAAGAGCATCGAACATTGTTCTCTTTTTTCAATGTTGGCAGTATTAAA
TTAAAGTCTGATCAAGCGGCGAGTGCATGTACAAGATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Haemophilus influenzae Rd KW20 |
58.824 |
98.837 |
0.581 |