Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EKL02_RS04725 Genome accession   NZ_CP035311
Coordinates   1046925..1047326 (+) Length   133 a.a.
NCBI ID   WP_128900969.1    Uniprot ID   -
Organism   Janthinobacterium sp. 17J80-10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1041925..1052326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKL02_RS04700 (EKL02_04700) mtgA 1042302..1042997 (+) 696 WP_128900965.1 monofunctional biosynthetic peptidoglycan transglycosylase -
  EKL02_RS04705 (EKL02_04705) corA 1043344..1044309 (+) 966 WP_128900966.1 magnesium/cobalt transporter CorA -
  EKL02_RS04710 (EKL02_04710) hemL 1044322..1045605 (-) 1284 WP_128900967.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EKL02_RS04715 (EKL02_04715) - 1045649..1046500 (-) 852 WP_128900968.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  EKL02_RS04720 (EKL02_04720) - 1046597..1046749 (+) 153 WP_119787245.1 rubredoxin -
  EKL02_RS04725 (EKL02_04725) pilG 1046925..1047326 (+) 402 WP_128900969.1 response regulator Regulator
  EKL02_RS04730 (EKL02_04730) - 1047349..1047714 (+) 366 WP_128900970.1 response regulator -
  EKL02_RS04735 (EKL02_04735) - 1047725..1048300 (+) 576 WP_128900971.1 chemotaxis protein CheW -
  EKL02_RS04740 (EKL02_04740) - 1048361..1050685 (+) 2325 WP_128900972.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14498.77 Da        Isoelectric Point: 7.8786

>NTDB_id=339264 EKL02_RS04725 WP_128900969.1 1046925..1047326(+) (pilG) [Janthinobacterium sp. 17J80-10]
MTTPQDNAGIKIMVIDDSSTIRRSAEIFLGQAGYQVVLAEDGFDALAKMNDHKPSLIFCDILMPRLDGYQTCALIKKSAK
FHATPVVMLSSKDGLFDRARGAMVGSDAYLTKPFTKDSLLKTVSEHTAQALSK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=339264 EKL02_RS04725 WP_128900969.1 1046925..1047326(+) (pilG) [Janthinobacterium sp. 17J80-10]
ATGACAACACCGCAGGATAACGCCGGTATAAAGATTATGGTGATTGACGATAGCAGCACGATTCGCCGATCCGCCGAGAT
TTTTCTGGGGCAGGCCGGCTACCAGGTGGTGCTTGCCGAAGACGGCTTCGATGCGCTGGCCAAAATGAACGATCACAAGC
CGTCGCTGATTTTCTGCGACATCCTGATGCCGCGCCTGGATGGATATCAGACCTGCGCGCTCATCAAGAAAAGTGCAAAG
TTTCATGCCACGCCTGTCGTCATGCTTTCTTCCAAGGACGGCCTGTTTGACCGTGCGCGCGGCGCGATGGTCGGCTCGGA
TGCCTATCTGACCAAGCCGTTTACCAAGGACAGCCTGCTCAAAACCGTAAGCGAACATACAGCACAAGCACTTTCCAAGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.167

90.226

0.534

Multiple sequence alignment