Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | F1719_RS22145 | Genome accession | NZ_CP043852 |
| Coordinates | 4527566..4528006 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli ATCC 8739 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4522566..4533006
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F1719_RS22120 (F1719_22595) | coaE | 4523056..4523676 (-) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
| F1719_RS22125 | - | 4523701..4523745 (+) | 45 | WP_120795372.1 | protein YacM | - |
| F1719_RS22130 (F1719_22600) | guaC | 4523901..4524944 (+) | 1044 | WP_001217335.1 | GMP reductase | - |
| F1719_RS22135 (F1719_22605) | hofC | 4524979..4526181 (-) | 1203 | WP_000157266.1 | protein transport protein HofC | - |
| F1719_RS22140 (F1719_22610) | pilB | 4526171..4527556 (-) | 1386 | WP_001025145.1 | type II secretion system protein GspE | Machinery gene |
| F1719_RS22145 (F1719_22615) | pilA | 4527566..4528006 (-) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| F1719_RS22150 (F1719_22620) | nadC | 4528209..4529102 (-) | 894 | WP_001135174.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| F1719_RS22155 (F1719_22625) | ampD | 4529190..4529741 (+) | 552 | WP_000923721.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| F1719_RS22160 (F1719_22630) | ampE | 4529738..4530592 (+) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| F1719_RS22165 (F1719_22635) | aroP | 4530635..4532008 (-) | 1374 | WP_203448658.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=339210 F1719_RS22145 WP_000360904.1 4527566..4528006(-) (pilA) [Escherichia coli ATCC 8739]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=339210 F1719_RS22145 WP_000360904.1 4527566..4528006(-) (pilA) [Escherichia coli ATCC 8739]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |