Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ESP48_RS05110 Genome accession   NZ_CP035306
Coordinates   951236..952003 (+) Length   255 a.a.
NCBI ID   WP_002952299.1    Uniprot ID   A0AAN2DBC4
Organism   Streptococcus thermophilus strain IDCC2201     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 946236..957003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ESP48_RS05095 (ESP48_05095) - 948552..949235 (-) 684 WP_011226711.1 YoaK family protein -
  ESP48_RS05100 (ESP48_05100) rlmH 949251..949730 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ESP48_RS05105 (ESP48_05105) htrA 949935..951170 (+) 1236 WP_014727759.1 S1C family serine protease Regulator
  ESP48_RS05110 (ESP48_05110) spo0J 951236..952003 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator
  ESP48_RS05115 (ESP48_05115) dnaA 952244..953608 (+) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  ESP48_RS05120 (ESP48_05120) dnaN 953763..954899 (+) 1137 WP_011680575.1 DNA polymerase III subunit beta -
  ESP48_RS05125 (ESP48_05125) - 954950..955141 (+) 192 WP_002886272.1 DUF951 domain-containing protein -
  ESP48_RS05130 (ESP48_05130) ychF 955354..956469 (+) 1116 WP_011680576.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.81 Da        Isoelectric Point: 9.6649

>NTDB_id=339178 ESP48_RS05110 WP_002952299.1 951236..952003(+) (spo0J) [Streptococcus thermophilus strain IDCC2201]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=339178 ESP48_RS05110 WP_002952299.1 951236..952003(+) (spo0J) [Streptococcus thermophilus strain IDCC2201]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment