Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   F1612_RS12020 Genome accession   NZ_CP043843
Coordinates   2388895..2389698 (-) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCCP 16830     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2383895..2394698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1612_RS11995 (F1612_12200) metG 2384193..2386166 (-) 1974 WP_001051132.1 methionine--tRNA ligase -
  F1612_RS12000 (F1612_12205) rsmI 2386450..2387289 (-) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  F1612_RS12005 (F1612_12210) - 2387291..2387539 (-) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  F1612_RS12010 (F1612_12215) - 2387532..2388257 (-) 726 WP_158173042.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  F1612_RS12015 (F1612_12220) yabA 2388531..2388878 (-) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  F1612_RS12020 (F1612_12225) yaaT 2388895..2389698 (-) 804 WP_001134193.1 stage 0 sporulation family protein Regulator
  F1612_RS12025 (F1612_12230) - 2389699..2390625 (-) 927 WP_000344337.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  F1612_RS12030 (F1612_12235) - 2390839..2391168 (-) 330 WP_000781979.1 cyclic-di-AMP receptor -
  F1612_RS12035 (F1612_12240) tmk 2391196..2391813 (-) 618 WP_001272126.1 dTMP kinase -
  F1612_RS12040 (F1612_12245) - 2391815..2393152 (-) 1338 WP_158173043.1 aminotransferase class V-fold PLP-dependent enzyme -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=339124 F1612_RS12020 WP_001134193.1 2388895..2389698(-) (yaaT) [Staphylococcus aureus strain NCCP 16830]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=339124 F1612_RS12020 WP_001134193.1 2388895..2389698(-) (yaaT) [Staphylococcus aureus strain NCCP 16830]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622