Detailed information NTG0339014

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F1745_RS19825
• Genome accession: NZ_CP043825
• Coordinates: 3975043..3976026 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain RM8082
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3970043..3981026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1745_RS19800 (F1745_19895)	-	3971192..3971299 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F1745_RS19805 (F1745_19905)	-	3971675..3971782 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F1745_RS19810 (F1745_19915)	ldrD	3972158..3972265 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
F1745_RS19815 (F1745_19925)	yhjV	3972741..3974012 (+)	1272	WP_001402620.1	aromatic amino acid transport family protein	-
F1745_RS19820 (F1745_19930)	dppF	3974042..3975046 (-)	1005	WP_000107030.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F1745_RS19825 (F1745_19935)	amiE	3975043..3976026 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
F1745_RS19830 (F1745_19940)	dppC	3976037..3976939 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F1745_RS19835 (F1745_19945)	dppB	3976949..3977968 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F1745_RS19840 (F1745_19955)	dppA	3978119..3979726 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=339014 F1745_RS19825 WP_001196486.1 3975043..3976026(-) (amiE) [Escherichia coli strain RM8082]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=339014 F1745_RS19825 WP_001196486.1 3975043..3976026(-) (amiE) [Escherichia coli strain RM8082]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCTGGCGGTATGAGTCAG
CGTGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGTTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404