Detailed information NTG0338936

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F1748_RS20675
• Genome accession: NZ_CP043821
• Coordinates: 4173242..4174225 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain RM10740
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4168242..4179225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1748_RS20650 (F1748_20750)	-	4169391..4169498 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F1748_RS20655 (F1748_20760)	-	4169874..4169981 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F1748_RS20660 (F1748_20770)	-	4170357..4170464 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F1748_RS20665 (F1748_20780)	yhjV	4170940..4172211 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
F1748_RS20670 (F1748_20785)	dppF	4172241..4173245 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F1748_RS20675 (F1748_20790)	amiE	4173242..4174225 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
F1748_RS20680 (F1748_20795)	dppC	4174236..4175138 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F1748_RS20685 (F1748_20800)	dppB	4175148..4176167 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F1748_RS20690 (F1748_20810)	dppA	4176475..4178082 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
F1748_RS20695	-	4178434..4178934 (-)	501	WP_000469069.1	hypothetical protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=338936 F1748_RS20675 WP_001196486.1 4173242..4174225(-) (amiE) [Escherichia coli strain RM10740]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=338936 F1748_RS20675 WP_001196486.1 4173242..4174225(-) (amiE) [Escherichia coli strain RM10740]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404