Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SSUST3_RS02010 | Genome accession | NC_015433 |
| Coordinates | 382062..384161 (+) | Length | 699 a.a. |
| NCBI ID | WP_013730153.1 | Uniprot ID | - |
| Organism | Streptococcus suis ST3 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 377062..389161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUST3_RS01990 (SSUST3_0385) | - | 378308..379396 (+) | 1089 | WP_002935136.1 | nucleotidyltransferase | - |
| SSUST3_RS01995 (SSUST3_0386) | - | 379398..379778 (+) | 381 | WP_002935135.1 | TipAS antibiotic-recognition domain-containing protein | - |
| SSUST3_RS02000 (SSUST3_0387) | - | 379838..381217 (+) | 1380 | WP_013730152.1 | P-loop NTPase fold protein | - |
| SSUST3_RS02005 (SSUST3_0388) | - | 381237..381647 (+) | 411 | WP_004194216.1 | peptide deformylase | - |
| SSUST3_RS02010 (SSUST3_0389) | clpC | 382062..384161 (+) | 2100 | WP_013730153.1 | AAA family ATPase | Regulator |
| SSUST3_RS02015 (SSUST3_0390) | malQ | 384343..385851 (+) | 1509 | WP_004194210.1 | 4-alpha-glucanotransferase | - |
| SSUST3_RS02020 (SSUST3_0391) | glgP | 385844..388108 (+) | 2265 | WP_004194208.1 | glycogen/starch/alpha-glucan family phosphorylase | - |
| SSUST3_RS02025 (SSUST3_0392) | - | 388335..389042 (-) | 708 | WP_004194205.1 | UTRA domain-containing protein | - |
Sequence
Protein
Download Length: 699 a.a. Molecular weight: 77218.10 Da Isoelectric Point: 4.8576
>NTDB_id=33889 SSUST3_RS02010 WP_013730153.1 382062..384161(+) (clpC) [Streptococcus suis ST3]
MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRN
LTQDAREGKLDPVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIHK
NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLIDVTAAHLAAQH
PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD
IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS
EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII
IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK
GFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYLEADVVDGSIQIKEQSFA
MNNNFNNFNNMDDIFNQLMGNMGGYSTERRRYSINGREVTPEEFAMYRQTGRLPQTEEVAQTQAKGQIKSDGILAKLGRN
LTQDAREGKLDPVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGAFEENVQNLVDEVKKAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTIHK
NAALARRFNEVKVNAPSAEDTYQILKGIKPLYEAHHNIELPDEVLRAAVDYSVQYIPQRSLPDKAIDLIDVTAAHLAAQH
PVTDIQTLEAEMAEAKQLQLEAAEKEDYEKALNEKVRIDKLQKQIDNHTEQQKVVATVNDVAQAVERMTGIPVSQMGASD
IERLKELKNRLAANVIGQDDAVEAVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGNKDAIIRLDMS
EYSDRTAVSKLIGTTAGYIGYDDNSHTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGHLTDGQGNQVNFKNTII
IATSNAGFGYGMAEGEENQDIMDRIAPFFRPEFLNRFNAVIEFKHLDKDDLKAIVELLLAQVNNTLAKKGIQLTVTEAAK
GFLMEEGYDKAMGARPLRRVIENQIRDKVTDYYLDHVDVKYLEADVVDGSIQIKEQSFA
Nucleotide
Download Length: 2100 bp
>NTDB_id=33889 SSUST3_RS02010 WP_013730153.1 382062..384161(+) (clpC) [Streptococcus suis ST3]
ATGAACAACAATTTCAATAATTTTAACAATATGGACGATATTTTCAATCAACTTATGGGGAACATGGGTGGATACAGTAC
AGAACGACGTCGCTATTCTATCAATGGGCGTGAAGTGACACCGGAGGAATTCGCTATGTACCGTCAGACTGGTCGCCTGC
CACAGACCGAAGAAGTGGCTCAAACACAGGCTAAAGGTCAGATAAAGTCAGATGGGATTCTTGCAAAACTGGGGCGCAAT
TTGACCCAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACAGCGGAAATTTT
GGCTCGCCGTACGAAAAATAATCCTGTTTTGGTCGGTGATGCTGGTGTTGGTAAAACTGCGGTAGTAGAAGGATTGGCTC
AAGCCATTGTCAACGGAGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATTGACATTTCTGGCTTGGAGGCA
GGGACCCAGTACCGTGGAGCTTTTGAGGAAAATGTGCAAAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCT
CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTC
TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACCATTCATAAG
AACGCCGCACTGGCTCGTCGTTTCAATGAAGTCAAGGTTAATGCTCCGTCCGCAGAAGACACCTACCAGATTTTGAAAGG
GATTAAGCCGCTTTATGAAGCCCACCACAATATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCTGTCC
AATATATTCCACAACGTAGCTTGCCTGATAAGGCTATTGACCTGATCGATGTGACCGCTGCACACTTGGCTGCACAACAT
CCTGTGACAGATATTCAGACCTTGGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCGGCTGAGAAAGAGGA
TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG
TGGTGGCGACTGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGAC
ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCTAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCG
TGCCATTCGTCGGAATCGTGCAGGTTTTGATGATGGCAACCGTCCGATTGGTTCCTTCCTCTTTGTCGGTCCGACAGGTG
TGGGTAAGACAGAGCTGGCTAAGCAACTAGCACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCT
GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC
TCTTACCGAGCGTGTCCGCCGCAATCCGTACTCAATCGTTCTTCTGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA
CCCTTCTCTTGCAAGTGCTAGATGACGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT
ATCGCGACTTCTAATGCAGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGTATCGCACC
ATTCTTCCGTCCGGAGTTCCTTAATCGTTTTAACGCAGTTATCGAATTCAAGCACTTGGATAAAGATGATCTCAAAGCCA
TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCCGCCAAA
GGATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCCCGTCCTCTGCGTCGTGTGATTGAAAATCAGATTCGAGA
CAAGGTAACAGATTACTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA
AAGAGCAAAGCTTTGCTTAA
ATGAACAACAATTTCAATAATTTTAACAATATGGACGATATTTTCAATCAACTTATGGGGAACATGGGTGGATACAGTAC
AGAACGACGTCGCTATTCTATCAATGGGCGTGAAGTGACACCGGAGGAATTCGCTATGTACCGTCAGACTGGTCGCCTGC
CACAGACCGAAGAAGTGGCTCAAACACAGGCTAAAGGTCAGATAAAGTCAGATGGGATTCTTGCAAAACTGGGGCGCAAT
TTGACCCAAGATGCGCGTGAAGGTAAGTTGGATCCAGTCATTGGACGAAACAAGGAAATCCAAGAAACAGCGGAAATTTT
GGCTCGCCGTACGAAAAATAATCCTGTTTTGGTCGGTGATGCTGGTGTTGGTAAAACTGCGGTAGTAGAAGGATTGGCTC
AAGCCATTGTCAACGGAGATGTGCCAGCAGCCATTAAGAACAAGGAAATCATCTCCATTGACATTTCTGGCTTGGAGGCA
GGGACCCAGTACCGTGGAGCTTTTGAGGAAAATGTGCAAAATCTTGTGGATGAAGTCAAAAAAGCTGGAAATATCATTCT
CTTCTTTGATGAAATTCATCAGATTTTGGGAGCTGGTAGCACTGGCGGAGACTCAGGTTCCAAGGGTTTAGCGGATATTC
TCAAACCAGCTTTATCCCGTGGGGAATTGACGGTTATCGGTGCCACTACACAGGACGAATACCGCAATACCATTCATAAG
AACGCCGCACTGGCTCGTCGTTTCAATGAAGTCAAGGTTAATGCTCCGTCCGCAGAAGACACCTACCAGATTTTGAAAGG
GATTAAGCCGCTTTATGAAGCCCACCACAATATTGAATTGCCAGATGAGGTTTTGAGAGCTGCGGTTGATTATTCTGTCC
AATATATTCCACAACGTAGCTTGCCTGATAAGGCTATTGACCTGATCGATGTGACCGCTGCACACTTGGCTGCACAACAT
CCTGTGACAGATATTCAGACCTTGGAAGCAGAAATGGCTGAGGCAAAACAGTTGCAGTTGGAAGCGGCTGAGAAAGAGGA
TTATGAAAAAGCCTTGAATGAAAAAGTCCGTATTGATAAGCTACAAAAACAGATTGATAATCATACGGAGCAACAGAAAG
TGGTGGCGACTGTTAATGATGTGGCTCAGGCGGTTGAGCGGATGACAGGAATTCCAGTCTCTCAAATGGGAGCTTCTGAC
ATTGAACGACTCAAGGAATTGAAAAATCGTCTGGCAGCTAACGTTATCGGTCAAGACGATGCGGTGGAAGCTGTATCTCG
TGCCATTCGTCGGAATCGTGCAGGTTTTGATGATGGCAACCGTCCGATTGGTTCCTTCCTCTTTGTCGGTCCGACAGGTG
TGGGTAAGACAGAGCTGGCTAAGCAACTAGCACTAGACTTGTTTGGTAACAAGGATGCCATTATTCGTTTGGATATGTCT
GAATACAGCGATCGGACAGCCGTTTCCAAATTAATCGGTACCACAGCTGGCTACATTGGCTACGATGACAATTCCCATAC
TCTTACCGAGCGTGTCCGCCGCAATCCGTACTCAATCGTTCTTCTGGATGAGATTGAAAAAGCTGATCCACAAGTGATTA
CCCTTCTCTTGCAAGTGCTAGATGACGGGCATTTGACTGATGGACAGGGCAACCAAGTTAACTTTAAAAATACCATTATT
ATCGCGACTTCTAATGCAGGTTTTGGTTATGGAATGGCAGAAGGTGAAGAAAATCAAGACATCATGGACCGTATCGCACC
ATTCTTCCGTCCGGAGTTCCTTAATCGTTTTAACGCAGTTATCGAATTCAAGCACTTGGATAAAGATGATCTCAAAGCCA
TTGTAGAATTACTCTTGGCCCAGGTCAATAATACCCTGGCGAAGAAAGGCATCCAATTAACGGTAACGGAAGCCGCCAAA
GGATTCTTGATGGAAGAAGGCTATGACAAGGCCATGGGAGCCCGTCCTCTGCGTCGTGTGATTGAAAATCAGATTCGAGA
CAAGGTAACAGATTACTATTTGGATCATGTTGATGTCAAATATCTGGAAGCGGATGTGGTTGATGGAAGCATCCAAATAA
AAGAGCAAAGCTTTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.234 |
100 |
0.476 |
| clpE | Streptococcus pneumoniae Rx1 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae D39 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae R6 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus pneumoniae TIGR4 |
49.689 |
92.132 |
0.458 |
| clpE | Streptococcus mutans UA159 |
49.61 |
91.702 |
0.455 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.737 |
92.418 |
0.413 |
| clpC | Streptococcus pneumoniae Rx1 |
41.617 |
95.565 |
0.398 |
| clpC | Streptococcus pneumoniae D39 |
41.617 |
95.565 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
41.379 |
95.422 |
0.395 |
| clpC | Streptococcus mutans UA159 |
43.366 |
88.412 |
0.383 |
| clpC | Streptococcus thermophilus LMD-9 |
42.72 |
89.413 |
0.382 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.56 |
89.413 |
0.381 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.834 |
88.841 |
0.381 |