Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EQH15_RS10765 Genome accession   NZ_CP035265
Coordinates   2083525..2084283 (+) Length   252 a.a.
NCBI ID   WP_000410383.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901920     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2078525..2089283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH15_RS10735 (EQH15_11275) comE 2079122..2079874 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  EQH15_RS10740 (EQH15_11280) comD/comD1 2079871..2081196 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  EQH15_RS10745 (EQH15_11285) comC/comC1 2081217..2081342 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  EQH15_RS10755 (EQH15_11295) rlmH 2081624..2082103 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EQH15_RS10760 (EQH15_11300) htrA 2082286..2083467 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  EQH15_RS10765 (EQH15_11305) spo0J 2083525..2084283 (+) 759 WP_000410383.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=338742 EQH15_RS10765 WP_000410383.1 2083525..2084283(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901920]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=338742 EQH15_RS10765 WP_000410383.1 2083525..2084283(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901920]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504


Multiple sequence alignment