Detailed information NTG0338685

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: F1539_RS02475
• Genome accession: NZ_CP043772
• Coordinates: 497225..498646 (+)
• Length: 473 a.a.
• NCBI ID: WP_013525797.1
• Uniprot ID: -
• Organism: Haemophilus influenzae biotype aegyptius strain HE24/F3037
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 492225..503646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1539_RS02455 (F1539_02460)	-	494177..495169 (+)	993	WP_013525795.1	DNA cytosine methyltransferase	-
F1539_RS02460 (F1539_02465)	-	495172..496128 (+)	957	WP_006996034.1	HaeIII family restriction endonuclease	-
F1539_RS02470 (F1539_02475)	-	496337..497212 (+)	876	WP_013525796.1	hypothetical protein	-
F1539_RS02475 (F1539_02480)	sbcB	497225..498646 (+)	1422	WP_013525797.1	exodeoxyribonuclease I	Machinery gene
F1539_RS02480 (F1539_02485)	phoR	499337..500614 (-)	1278	WP_013525798.1	phosphate regulon sensor histidine kinase PhoR	-
F1539_RS02485 (F1539_02490)	phoB	500611..501306 (-)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
F1539_RS02490 (F1539_02495)	pstB	501383..502150 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
F1539_RS02495 (F1539_02500)	pstA	502160..503008 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54266.61 Da
• Isoelectric Point: 5.5584

>NTDB_id=338685 F1539_RS02475 WP_013525797.1 497225..498646(+) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE24/F3037]
MAKNFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDAGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMGKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=338685 F1539_RS02475 WP_013525797.1 497225..498646(+) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE24/F3037]
ATGGCAAAAAATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGCTGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCATGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGGGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGGGGAGTTTCATCCG
TTCCATTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGCCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAGCGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.721	98.52	0.539