Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH16_RS09500 Genome accession   NZ_CP035264
Coordinates   1832443..1833480 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain TVO_1901921     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1827443..1838480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH16_RS09475 (EQH16_09950) - 1828182..1829513 (-) 1332 WP_000390039.1 hemolysin family protein -
  EQH16_RS09480 (EQH16_09955) endA 1829804..1830628 (-) 825 WP_001036786.1 DNA-entry nuclease EndA Machinery gene
  EQH16_RS09485 (EQH16_09960) - 1830667..1830855 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  EQH16_RS09490 (EQH16_09965) murA 1830848..1832131 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH16_RS09495 (EQH16_09970) - 1832155..1832385 (-) 231 WP_000250393.1 DUF1146 family protein -
  EQH16_RS09500 (EQH16_09975) sepM 1832443..1833480 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EQH16_RS09505 (EQH16_09980) coaD 1833464..1833952 (-) 489 WP_001280727.1 pantetheine-phosphate adenylyltransferase -
  EQH16_RS09510 (EQH16_09985) rsmD 1833942..1834481 (-) 540 WP_000706967.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH16_RS09515 (EQH16_09990) asnA 1834546..1835538 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH16_RS09520 (EQH16_10000) - 1835651..1836334 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  EQH16_RS09525 (EQH16_10005) - 1836390..1837130 (-) 741 WP_001841916.1 RNA methyltransferase -
  EQH16_RS09530 (EQH16_10010) - 1837164..1837442 (+) 279 WP_001174613.1 acylphosphatase -
  EQH16_RS09535 (EQH16_10015) yidC 1837520..1838446 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=338641 EQH16_RS09500 WP_000727277.1 1832443..1833480(-) (sepM) [Streptococcus pneumoniae strain TVO_1901921]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=338641 EQH16_RS09500 WP_000727277.1 1832443..1833480(-) (sepM) [Streptococcus pneumoniae strain TVO_1901921]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCACAAAATATGGCCAAGTATCAAGGTCTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGGGTTTATGTCT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGAAAAAATGGAATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment