Detailed information NTG0338616

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: F1538_RS02090
• Genome accession: NZ_CP043771
• Coordinates: 455660..457081 (+)
• Length: 473 a.a.
• NCBI ID: WP_013525797.1
• Uniprot ID: -
• Organism: Haemophilus influenzae biotype aegyptius strain HE15/F3028
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 450660..462081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1538_RS02070 (F1538_02075)	-	452612..453604 (+)	993	WP_013525795.1	DNA cytosine methyltransferase	-
F1538_RS02075 (F1538_02080)	-	453607..454563 (+)	957	WP_006996034.1	HaeIII family restriction endonuclease	-
F1538_RS02085 (F1538_02090)	-	454772..455647 (+)	876	WP_013525796.1	hypothetical protein	-
F1538_RS02090 (F1538_02095)	sbcB	455660..457081 (+)	1422	WP_013525797.1	exodeoxyribonuclease I	Machinery gene
F1538_RS02095 (F1538_02100)	phoR	457772..459049 (-)	1278	WP_013525798.1	phosphate regulon sensor histidine kinase PhoR	-
F1538_RS02100 (F1538_02105)	phoB	459046..459741 (-)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
F1538_RS02105 (F1538_02110)	pstB	459818..460585 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
F1538_RS02110 (F1538_02115)	pstA	460595..461443 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54266.61 Da
• Isoelectric Point: 5.5584

>NTDB_id=338616 F1538_RS02090 WP_013525797.1 455660..457081(+) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
MAKNFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDAGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMGKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=338616 F1538_RS02090 WP_013525797.1 455660..457081(+) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE15/F3028]
ATGGCAAAAAATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGCTGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCATGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGGGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGGGGAGTTTCATCCG
TTCCATTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGCCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAGCGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.721	98.52	0.539