Detailed information NTG0338559

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: F1537_RS02215
• Genome accession: NZ_CP043770
• Coordinates: 405998..407419 (-)
• Length: 473 a.a.
• NCBI ID: WP_013525797.1
• Uniprot ID: -
• Organism: Haemophilus influenzae biotype aegyptius strain HE7/F1946
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 400998..412419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1537_RS02195 (F1537_02205)	pstA	401636..402484 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
F1537_RS02200 (F1537_02210)	pstB	402494..403261 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
F1537_RS02205 (F1537_02215)	phoB	403338..404033 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
F1537_RS02210 (F1537_02220)	phoR	404030..405307 (+)	1278	WP_013525798.1	phosphate regulon sensor histidine kinase PhoR	-
F1537_RS02215 (F1537_02225)	sbcB	405998..407419 (-)	1422	WP_013525797.1	exodeoxyribonuclease I	Machinery gene
F1537_RS02220 (F1537_02230)	-	407432..408307 (-)	876	WP_013525796.1	hypothetical protein	-
F1537_RS02230 (F1537_02240)	-	408516..409472 (-)	957	WP_006996034.1	HaeIII family restriction endonuclease	-
F1537_RS02235 (F1537_02245)	-	409475..410467 (-)	993	WP_013525795.1	DNA cytosine methyltransferase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54266.61 Da
• Isoelectric Point: 5.5584

>NTDB_id=338559 F1537_RS02215 WP_013525797.1 405998..407419(-) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE7/F1946]
MAKNFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDAGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMGKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETADR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=338559 F1537_RS02215 WP_013525797.1 405998..407419(-) (sbcB) [Haemophilus influenzae biotype aegyptius strain HE7/F1946]
ATGGCAAAAAATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGCTGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCATGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGGGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGGGGAGTTTCATCCG
TTCCATTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAGATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGCCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAGCGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.721	98.52	0.539