Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH18_RS09115 Genome accession   NZ_CP035262
Coordinates   1825563..1826600 (-) Length   345 a.a.
NCBI ID   WP_061750848.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901923     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1820563..1831600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH18_RS09090 (EQH18_09605) - 1821302..1822633 (-) 1332 WP_000390043.1 hemolysin family protein -
  EQH18_RS09095 (EQH18_09610) endA 1822924..1823748 (-) 825 WP_001036789.1 DNA-entry nuclease EndA Machinery gene
  EQH18_RS09100 (EQH18_09615) - 1823787..1823975 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  EQH18_RS09105 (EQH18_09620) murA 1823968..1825251 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH18_RS09110 (EQH18_09625) - 1825275..1825505 (-) 231 WP_000250392.1 DUF1146 family protein -
  EQH18_RS09115 (EQH18_09630) sepM 1825563..1826600 (-) 1038 WP_061750848.1 SepM family pheromone-processing serine protease Regulator
  EQH18_RS09120 (EQH18_09635) coaD 1826584..1827072 (-) 489 WP_001280736.1 pantetheine-phosphate adenylyltransferase -
  EQH18_RS09125 (EQH18_09640) rsmD 1827062..1827601 (-) 540 WP_000706966.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH18_RS09130 (EQH18_09645) asnA 1827666..1828658 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH18_RS09135 (EQH18_09655) - 1828770..1829453 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  EQH18_RS09140 (EQH18_09660) - 1829509..1830249 (-) 741 WP_000152680.1 RNA methyltransferase -
  EQH18_RS09145 (EQH18_09665) - 1830283..1830561 (+) 279 WP_001174613.1 acylphosphatase -
  EQH18_RS09150 (EQH18_09670) yidC 1830639..1831565 (+) 927 WP_000835955.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37492.51 Da        Isoelectric Point: 5.0724

>NTDB_id=338486 EQH18_RS09115 WP_061750848.1 1825563..1826600(-) (sepM) [Streptococcus pneumoniae strain TVO_1901923]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFLRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNSP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=338486 EQH18_RS09115 WP_061750848.1 1825563..1826600(-) (sepM) [Streptococcus pneumoniae strain TVO_1901923]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTCTGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAGTCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.706

98.551

0.588


Multiple sequence alignment