Detailed information NTG0338476

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: F1D59_RS22650
• Genome accession: NZ_CP043638
• Coordinates: 5057618..5058661 (+)
• Length: 347 a.a.
• NCBI ID: WP_030655540.1
• Uniprot ID: A0ABQ3NX85
• Organism: Streptomyces sp. INR7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5052618..5063661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1D59_RS22630 (F1D59_22730)	-	5052918..5054339 (-)	1422	WP_185558488.1	GH1 family beta-glucosidase	-
F1D59_RS22635 (F1D59_22735)	-	5054336..5055160 (-)	825	WP_030025949.1	carbohydrate ABC transporter permease	-
F1D59_RS22640 (F1D59_22740)	-	5055157..5056152 (-)	996	WP_037693892.1	carbohydrate ABC transporter permease	-
F1D59_RS22645 (F1D59_22745)	-	5056160..5057512 (-)	1353	WP_030655543.1	ABC transporter substrate-binding protein	-
F1D59_RS22650 (F1D59_22750)	cytR	5057618..5058661 (+)	1044	WP_030655540.1	LacI family DNA-binding transcriptional regulator	Regulator
F1D59_RS22660 (F1D59_22760)	orn	5058905..5059507 (-)	603	WP_030655539.1	oligoribonuclease	-
F1D59_RS22665 (F1D59_22765)	-	5059613..5060785 (-)	1173	WP_030655537.1	helix-turn-helix domain-containing protein	-
F1D59_RS22670 (F1D59_22770)	-	5061162..5061587 (-)	426	WP_030655533.1	hypothetical protein	-
F1D59_RS22675 (F1D59_22775)	-	5061910..5062443 (+)	534	WP_030655530.1	universal stress protein	-
F1D59_RS22680 (F1D59_22780)	-	5062542..5063111 (+)	570	WP_030655527.1	GPR1/FUN34/YaaH family transporter	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 36769.82 Da
• Isoelectric Point: 8.5028

>NTDB_id=338476 F1D59_RS22650 WP_030655540.1 5057618..5058661(+) (cytR) [Streptomyces sp. INR7]
MNGNGRSGGRPTLEEVAVRAGVGRGTVSRVINGSSKVSEQTKAAVEAAVTELGYVPNRAARALAANRNDAIALVIPEPEA
RFFAEPYFSEVVRGVGAALAETDIQLVLTLAGSDRERRRLAQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPCVDSDNLAGAAEAVRHLLDRGRRTIATITGPLDVYGAHCRLDGYRQALAAAGRPVDERLVAVADFTEEGGRRA
MRELLERSPALDAVFASSDVMAAGARRELRAAGRRIPQDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMARMLLERV
AGRRGSAASAGGPAVVLPNRLVVRESS

Nucleotide

• Length: 1044 bp

>NTDB_id=338476 F1D59_RS22650 WP_030655540.1 5057618..5058661(+) (cytR) [Streptomyces sp. INR7]
ATGAACGGGAACGGGCGCAGCGGGGGACGGCCGACCCTGGAAGAGGTCGCGGTACGCGCCGGAGTCGGGCGCGGCACCGT
GTCCCGGGTGATCAACGGGTCCTCCAAGGTCAGCGAGCAGACCAAGGCCGCGGTCGAGGCGGCCGTGACCGAGCTGGGGT
ACGTGCCGAACCGTGCGGCCCGGGCCCTCGCGGCCAACCGCAACGACGCCATCGCCCTCGTGATCCCCGAGCCCGAGGCC
CGGTTCTTCGCGGAGCCGTACTTCTCCGAAGTGGTCCGCGGGGTCGGGGCCGCGCTCGCGGAGACCGACATCCAGCTCGT
CCTCACCCTGGCCGGGAGCGACCGTGAGCGCCGCCGCCTCGCGCAGTACCTCTCCGGGCACCGCGTCGACGGCGTGCTGC
TGGTCTCCGTCCACGCCGGGGACCCGCTCCCGGAGCTGCTGGCCGAGCTGGGCATCCCGACGGTGATCAGCGGCCGCCGT
TCCGCCGCCGAGACGCTGCCCTGCGTCGACTCCGACAACCTGGCGGGCGCCGCCGAGGCCGTACGCCACCTGCTCGACCG
GGGCCGCCGTACGATCGCCACGATCACCGGCCCGCTGGACGTGTACGGGGCCCACTGCCGGCTCGACGGCTACCGGCAGG
CCCTGGCCGCCGCCGGCCGGCCCGTCGACGAGCGGCTGGTCGCGGTCGCCGACTTCACCGAGGAGGGCGGCCGCCGGGCC
ATGCGCGAGCTGCTCGAACGCAGCCCCGCCCTCGACGCGGTCTTCGCCTCCTCGGACGTCATGGCGGCCGGCGCCCGGCG
GGAGCTGCGTGCCGCGGGGCGCCGGATCCCGCAGGACGTGGCACTGGTCGGCTTCGACGACTCCGTGGTGGCCCGGCACA
TGGATCCGCCGCTGACCAGCGTCCGCCAGCCCATCGAGGAGATGGGCCGGACCATGGCGAGGATGCTGCTGGAGCGCGTC
GCGGGCCGGCGGGGCAGCGCCGCGAGCGCGGGCGGGCCGGCGGTCGTCCTGCCGAACAGACTGGTGGTCCGGGAGTCGTC
CTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-347)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.537	98.271	0.369
cytR	Vibrio parahaemolyticus RIMD 2210633	36.657	98.271	0.36