Detailed information    

insolico Bioinformatically predicted

Overview


Name   dinR/lexA   Type   Regulator
Locus tag   F1D59_RS09095 Genome accession   NZ_CP043638
Coordinates   2115046..2115840 (+) Length   264 a.a.
NCBI ID   WP_030027001.1    Uniprot ID   A0ABQ3NFS1
Organism   Streptomyces sp. INR7     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2110046..2120840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1D59_RS09085 (F1D59_09125) - 2111023..2113914 (-) 2892 WP_053612463.1 vitamin B12-dependent ribonucleotide reductase -
  F1D59_RS09090 (F1D59_09130) nrdR 2114060..2114572 (-) 513 WP_030821262.1 transcriptional regulator NrdR -
  F1D59_RS09095 (F1D59_09135) dinR/lexA 2115046..2115840 (+) 795 WP_030027001.1 transcriptional repressor LexA Regulator
  F1D59_RS09100 (F1D59_09140) - 2115948..2117918 (-) 1971 WP_030650330.1 ATP-dependent DNA helicase -
  F1D59_RS09105 (F1D59_09145) - 2117973..2119835 (-) 1863 WP_078944050.1 IucA/IucC family siderophore biosynthesis protein -
  F1D59_RS09110 (F1D59_09150) - 2119934..2120641 (-) 708 WP_030650324.1 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 28532.31 Da        Isoelectric Point: 7.4239

>NTDB_id=338436 F1D59_RS09095 WP_030027001.1 2115046..2115840(+) (dinR/lexA) [Streptomyces sp. INR7]
MTTTADSAAITAQNRSQSRLEPVHAMNDANLNPDAEAAVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=338436 F1D59_RS09095 WP_030027001.1 2115046..2115840(+) (dinR/lexA) [Streptomyces sp. INR7]
GTGACCACGACCGCAGACAGTGCCGCCATCACTGCCCAGAACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCATGAA
CGACGCAAACCTGAACCCGGACGCGGAGGCCGCAGTGCGCCCCGCACGCTCGCTGCCAGGTCGACCTCCAGGCATCCGCG
CCGACAGCTCCGGGCTCACGGACCGGCAGCGGAGGGTCATCGAGGTCATTCGCGACTCCGTGCAGCGGCGGGGTTACCCG
CCGTCGATGCGGGAGATCGGCCAGGCCGTCGGCCTGTCCAGCACGTCGTCGGTGGCACACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGTCGCGACCCGCACCGGCCCCGGGCCTACGAGGTGCGCGGCTCGGACCAGCCCAGCTCGCAGCCGA
CGGACACCACCGGCAAGCCCGCCGCCTCCTACGTTCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAG
GAGTCGGTCGAGGACGTCTTCCCGCTCCCCCGCCAGCTCGTCGGCGACGGTGAGCTCTTCGTCCTCAAGGTCGTCGGCGA
CTCGATGATCGAAGCCGCCATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCCGTCGCCGAGAACGGCGACATCG
TCGCCGCGATGCTGGACGGCGAAGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGGCACGTCTGGCTCCTCCCGCACAAC
GCCGCCTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTCGCGGTCCTGCGCCGCGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375


Multiple sequence alignment