Detailed information
Bioinformatically predicted
Overview
| Name | pptA | Type | Regulator |
| Locus tag | EQH23_RS02545 | Genome accession | NZ_CP035257 |
| Coordinates | 507020..507751 (+) | Length | 243 a.a. |
| NCBI ID | WP_000889925.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901928 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 490728..510650 | 507020..507751 | within | 0 |
Gene organization within MGE regions
Location: 490728..510650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH23_RS02475 (EQH23_02610) | psrA | 491702..492499 (+) | 798 | WP_000651177.1 | tyrosine-type DNA invertase PsrA | - |
| EQH23_RS02480 (EQH23_02615) | - | 492510..493115 (+) | 606 | WP_001813510.1 | restriction endonuclease subunit S | - |
| EQH23_RS02485 (EQH23_02620) | - | 493063..494630 (-) | 1568 | Protein_495 | restriction endonuclease subunit S | - |
| EQH23_RS02490 (EQH23_02630) | - | 494630..496093 (-) | 1464 | WP_000029046.1 | class I SAM-dependent DNA methyltransferase | - |
| EQH23_RS02495 (EQH23_02635) | hsdR | 496106..498439 (-) | 2334 | WP_000229097.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| EQH23_RS02500 (EQH23_02645) | - | 499044..499553 (+) | 510 | WP_001088694.1 | DUF2812 domain-containing protein | - |
| EQH23_RS02505 (EQH23_02650) | hrcA | 499717..500751 (+) | 1035 | WP_000255770.1 | heat-inducible transcriptional repressor HrcA | - |
| EQH23_RS02510 (EQH23_02655) | grpE | 500778..501302 (+) | 525 | WP_000046031.1 | nucleotide exchange factor GrpE | - |
| EQH23_RS02515 (EQH23_02660) | dnaK | 501791..503614 (+) | 1824 | WP_000034673.1 | molecular chaperone DnaK | - |
| EQH23_RS02520 (EQH23_02665) | - | 503616..503972 (+) | 357 | WP_000114433.1 | hypothetical protein | - |
| EQH23_RS02525 (EQH23_02670) | dnaJ | 504374..505510 (+) | 1137 | WP_001810236.1 | molecular chaperone DnaJ | - |
| EQH23_RS02530 (EQH23_02675) | - | 505844..506083 (-) | 240 | WP_001810235.1 | hypothetical protein | - |
| EQH23_RS02535 (EQH23_02680) | - | 506245..506532 (-) | 288 | WP_000777760.1 | hypothetical protein | - |
| EQH23_RS02540 (EQH23_02685) | - | 506542..506952 (-) | 411 | WP_001278299.1 | HIT family protein | - |
| EQH23_RS02545 (EQH23_02690) | pptA | 507020..507751 (+) | 732 | WP_000889925.1 | ABC transporter ATP-binding protein | Regulator |
| EQH23_RS02550 (EQH23_02695) | - | 507748..508797 (+) | 1050 | WP_000653767.1 | ABC transporter permease | - |
| EQH23_RS02555 (EQH23_02700) | - | 508965..509294 (-) | 330 | WP_000132572.1 | hypothetical protein | - |
| EQH23_RS02560 (EQH23_02705) | - | 509571..509909 (+) | 339 | WP_000682135.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH23_RS02565 (EQH23_02710) | - | 509914..510650 (+) | 737 | Protein_511 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 243 a.a. Molecular weight: 26992.50 Da Isoelectric Point: 4.7792
>NTDB_id=338057 EQH23_RS02545 WP_000889925.1 507020..507751(+) (pptA) [Streptococcus pneumoniae strain TVO_1901928]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMLRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMLRLEQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL
Nucleotide
Download Length: 732 bp
>NTDB_id=338057 EQH23_RS02545 WP_000889925.1 507020..507751(+) (pptA) [Streptococcus pneumoniae strain TVO_1901928]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTATGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAGATGCTCCGTCTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTATGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAGATGCTCCGTCTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGTGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptA | Streptococcus salivarius strain HSISS4 |
71.784 |
99.177 |
0.712 |
| pptA | Streptococcus thermophilus LMD-9 |
70.954 |
99.177 |
0.704 |