Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH26_RS09680 Genome accession   NZ_CP035254
Coordinates   1896562..1897599 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain TVO_1901932     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1891562..1902599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH26_RS09655 (EQH26_10180) - 1892301..1893632 (-) 1332 WP_000390043.1 hemolysin family protein -
  EQH26_RS09660 (EQH26_10185) endA 1893923..1894747 (-) 825 WP_001036784.1 DNA-entry nuclease EndA Machinery gene
  EQH26_RS09665 (EQH26_10190) - 1894786..1894974 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  EQH26_RS09670 (EQH26_10195) murA 1894967..1896250 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH26_RS09675 (EQH26_10200) - 1896274..1896504 (-) 231 WP_000250393.1 DUF1146 family protein -
  EQH26_RS09680 (EQH26_10205) sepM 1896562..1897599 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EQH26_RS09685 (EQH26_10210) coaD 1897583..1898071 (-) 489 WP_001280746.1 pantetheine-phosphate adenylyltransferase -
  EQH26_RS09690 (EQH26_10215) rsmD 1898061..1898600 (-) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH26_RS09695 (EQH26_10220) asnA 1898665..1899657 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH26_RS09700 (EQH26_10230) - 1899769..1900452 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  EQH26_RS09705 (EQH26_10235) - 1900508..1901248 (-) 741 WP_000152701.1 RNA methyltransferase -
  EQH26_RS09710 (EQH26_10240) - 1901282..1901560 (+) 279 WP_001174613.1 acylphosphatase -
  EQH26_RS09715 (EQH26_10245) yidC 1901638..1902564 (+) 927 WP_000835943.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=337946 EQH26_RS09680 WP_000727277.1 1896562..1897599(-) (sepM) [Streptococcus pneumoniae strain TVO_1901932]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=337946 EQH26_RS09680 WP_000727277.1 1896562..1897599(-) (sepM) [Streptococcus pneumoniae strain TVO_1901932]
ATGAAAAAAAAGATTAGATGGCCCTTGTATGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTGGTGCCTTTGCC
CTACTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCTACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGAAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment