Detailed information NTG0337626

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH32_RS09670
• Genome accession: NZ_CP035248
• Coordinates: 1868747..1869151 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588017.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901939
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1863747..1874151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH32_RS09640 (EQH32_10150)	comYH	1864286..1865239 (-)	954	WP_000345118.1	class I SAM-dependent methyltransferase	Machinery gene
EQH32_RS09645 (EQH32_10155)	-	1865585..1866386 (+)	802	WP_128887635.1	IS5 family transposase	-
EQH32_RS09650 (EQH32_10160)	-	1866538..1867014 (+)	477	WP_000777686.1	GNAT family N-acetyltransferase	-
EQH32_RS09655 (EQH32_10165)	comGG/cglG	1867688..1868080 (-)	393	WP_001818966.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH32_RS09660 (EQH32_10170)	comGF/cglF	1868058..1868519 (-)	462	WP_000250538.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH32_RS09665 (EQH32_10175)	comGE/cglE	1868482..1868784 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH32_RS09670 (EQH32_10180)	comGD/cglD	1868747..1869151 (-)	405	WP_000588017.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH32_RS09675 (EQH32_10185)	comGC/cglC	1869144..1869470 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
EQH32_RS09680 (EQH32_10190)	comGB/cglB	1869472..1870488 (-)	1017	WP_001844019.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH32_RS09685 (EQH32_10195)	comGA/cglA/cilD	1870436..1871377 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH32_RS09690 (EQH32_10200)	-	1871453..1871818 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH32_RS09695 (EQH32_10205)	-	1871970..1873028 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.91 Da
• Isoelectric Point: 10.2164

>NTDB_id=337626 EQH32_RS09670 WP_000588017.1 1868747..1869151(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901939]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=337626 EQH32_RS09670 WP_000588017.1 1868747..1869151(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901939]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae D39	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae R6	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478