Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | FZ921_RS14475 | Genome accession | NZ_CP043458 |
| Coordinates | 3038154..3038669 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain 18WIARLN0024 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3033154..3043669
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ921_RS14455 (FZ921_14550) | - | 3033484..3034944 (+) | 1461 | WP_000004971.1 | amino acid permease | - |
| FZ921_RS14460 (FZ921_14555) | - | 3035221..3036426 (+) | 1206 | WP_000512696.1 | RtcB family protein | - |
| FZ921_RS14465 | - | 3036445..3036588 (+) | 144 | WP_162138624.1 | hypothetical protein | - |
| FZ921_RS14470 (FZ921_14560) | omp38 | 3036713..3037774 (-) | 1062 | WP_000777885.1 | outer membrane protein Omp38 | - |
| FZ921_RS14475 (FZ921_14565) | fimT | 3038154..3038669 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| FZ921_RS14480 (FZ921_14570) | - | 3038778..3039953 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| FZ921_RS14485 (FZ921_14575) | - | 3040080..3040523 (+) | 444 | WP_001176580.1 | VOC family protein | - |
| FZ921_RS14490 (FZ921_14580) | - | 3040566..3040919 (-) | 354 | WP_000457783.1 | multidrug efflux SMR transporter | - |
| FZ921_RS14495 (FZ921_14585) | - | 3041002..3041487 (-) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| FZ921_RS14500 (FZ921_14590) | - | 3041480..3043123 (-) | 1644 | WP_000281766.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=337595 FZ921_RS14475 WP_000477151.1 3038154..3038669(+) (fimT) [Acinetobacter baumannii strain 18WIARLN0024]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=337595 FZ921_RS14475 WP_000477151.1 3038154..3038669(+) (fimT) [Acinetobacter baumannii strain 18WIARLN0024]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAACTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAACTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |