Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FZ921_RS12005 Genome accession   NZ_CP043458
Coordinates   2499584..2500525 (-) Length   313 a.a.
NCBI ID   WP_001210791.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 18WIARLN0024     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2494584..2505525
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZ921_RS11990 (FZ921_12070) bauB 2496895..2497863 (-) 969 WP_001104128.1 siderophore-binding periplasmic lipoprotein BauB -
  FZ921_RS11995 (FZ921_12075) bauE 2497870..2498640 (-) 771 WP_032004524.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  FZ921_RS12000 (FZ921_12080) bauC 2498637..2499584 (-) 948 WP_032017571.1 ferric acinetobactin ABC transporter permease subunit BauC -
  FZ921_RS12005 (FZ921_12085) ceuB 2499584..2500525 (-) 942 WP_001210791.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  FZ921_RS12010 (FZ921_12090) basB 2501157..2503187 (+) 2031 WP_086227654.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  FZ921_RS12015 (FZ921_12095) basA 2503258..2505105 (-) 1848 WP_032017569.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34007.08 Da        Isoelectric Point: 8.6941

>NTDB_id=337586 FZ921_RS12005 WP_001210791.1 2499584..2500525(-) (ceuB) [Acinetobacter baumannii strain 18WIARLN0024]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=337586 FZ921_RS12005 WP_001210791.1 2499584..2500525(-) (ceuB) [Acinetobacter baumannii strain 18WIARLN0024]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACGGCCAGTCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCTGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCATATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTCATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTAGC
GTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCAATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419

Multiple sequence alignment