Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   FZ921_RS07460 Genome accession   NZ_CP043458
Coordinates   1550551..1551186 (+) Length   211 a.a.
NCBI ID   WP_032043173.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 18WIARLN0024     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1545551..1556186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZ921_RS07435 (FZ921_07490) - 1546391..1547404 (+) 1014 WP_001096106.1 aminoglycoside phosphotransferase family protein -
  FZ921_RS07440 (FZ921_07495) murU 1547404..1548093 (+) 690 WP_000646457.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU -
  FZ921_RS07445 (FZ921_07500) rsmG 1548181..1548813 (+) 633 WP_000553197.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  FZ921_RS07450 (FZ921_07505) - 1548835..1549617 (+) 783 WP_000057212.1 ParA family protein -
  FZ921_RS07455 (FZ921_07510) - 1549614..1550501 (+) 888 WP_000023429.1 ParB/RepB/Spo0J family partition protein -
  FZ921_RS07460 (FZ921_07515) exbB 1550551..1551186 (+) 636 WP_032043173.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  FZ921_RS07465 (FZ921_07520) - 1551202..1551630 (+) 429 WP_000669684.1 biopolymer transporter ExbD -
  FZ921_RS07470 (FZ921_07525) msbA 1551627..1553354 (+) 1728 WP_032058433.1 lipid A export permease/ATP-binding protein MsbA -
  FZ921_RS07475 (FZ921_07530) lpxK 1553357..1554367 (+) 1011 WP_032058432.1 tetraacyldisaccharide 4'-kinase -
  FZ921_RS07480 (FZ921_07535) kdsB 1554377..1555138 (+) 762 WP_000680697.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  FZ921_RS07485 (FZ921_07540) - 1555150..1556130 (+) 981 WP_001075416.1 DNA polymerase III subunit delta' -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23225.12 Da        Isoelectric Point: 6.4861

>NTDB_id=337572 FZ921_RS07460 WP_032043173.1 1550551..1551186(+) (exbB) [Acinetobacter baumannii strain 18WIARLN0024]
MWELVKAGGWLMLPLILCSILTVAISIERFVRLRRSQVLPKILMNDGSADISVVITNLEQDNNAQSTALGNILKAGFEHQ
EHGEQFARAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVG
MLIAIPALISYRYFQRVVQDYIAELEQQSTLFHASLFYKRSSVMQEHRRVG

Nucleotide


Download         Length: 636 bp        

>NTDB_id=337572 FZ921_RS07460 WP_032043173.1 1550551..1551186(+) (exbB) [Acinetobacter baumannii strain 18WIARLN0024]
ATGTGGGAACTTGTGAAAGCGGGCGGCTGGTTAATGCTGCCTTTAATTTTGTGTTCAATTTTAACCGTCGCAATTAGTAT
TGAGCGTTTTGTACGTTTAAGACGTTCACAAGTTTTACCTAAAATACTAATGAATGATGGCAGTGCAGATATTTCTGTTG
TCATAACAAATTTGGAACAGGATAATAATGCGCAAAGCACGGCATTGGGCAATATTCTAAAAGCTGGTTTTGAGCATCAG
GAACATGGCGAACAATTTGCTCGAGCACAAATGGAAGCTATGGCTTCTCAAGAAATTTCTTATTTAGAAAAAAATATTAA
CTTCTTAGGGACTTTAAGTGCTATAGCACCTCTACTAGGGCTGCTTGGAACAGTTGTGGGAATTATTGAGTCTTTTTTGG
TTATTGATTTTGGTTCGGCAGGTAGTCCTAGTTTAATGATTCCCGGTATTTCCAAGGCTTTGATCACAACAGCAGTTGGT
ATGCTCATTGCAATTCCTGCACTTATTTCCTATCGATATTTTCAAAGAGTAGTGCAAGATTATATTGCTGAGTTAGAGCA
ACAATCTACGCTATTTCATGCCTCATTGTTTTACAAACGTTCTTCAGTCATGCAAGAACATCGCCGCGTTGGTTGA

Domains

Predicted by InterProScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(67-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

43.455

90.521

0.393