Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH33_RS08860 Genome accession   NZ_CP035247
Coordinates   1759712..1760749 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain TVO_1901940     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1754712..1765749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH33_RS08835 (EQH33_09375) - 1755451..1756782 (-) 1332 WP_000390042.1 hemolysin family protein -
  EQH33_RS08840 (EQH33_09380) endA 1757073..1757897 (-) 825 WP_001036783.1 DNA-entry nuclease EndA Machinery gene
  EQH33_RS08845 (EQH33_09385) - 1757936..1758124 (-) 189 WP_001812859.1 DNA-directed RNA polymerase subunit beta -
  EQH33_RS08850 (EQH33_09390) murA 1758117..1759400 (-) 1284 WP_000358027.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH33_RS08855 (EQH33_09395) - 1759424..1759654 (-) 231 WP_000615437.1 DUF1146 family protein -
  EQH33_RS08860 (EQH33_09400) sepM 1759712..1760749 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EQH33_RS08865 (EQH33_09405) coaD 1760733..1761221 (-) 489 WP_001280769.1 pantetheine-phosphate adenylyltransferase -
  EQH33_RS08870 (EQH33_09410) rsmD 1761211..1761750 (-) 540 WP_000706963.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH33_RS08875 (EQH33_09415) asnA 1761815..1762807 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH33_RS08880 (EQH33_09425) - 1762919..1763602 (-) 684 WP_001016913.1 Bax inhibitor-1/YccA family protein -
  EQH33_RS08885 (EQH33_09430) - 1763658..1764398 (-) 741 WP_000152693.1 RNA methyltransferase -
  EQH33_RS08890 (EQH33_09435) - 1764432..1764710 (+) 279 WP_001174613.1 acylphosphatase -
  EQH33_RS08895 (EQH33_09440) yidC 1764788..1765714 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=337540 EQH33_RS08860 WP_000727277.1 1759712..1760749(-) (sepM) [Streptococcus pneumoniae strain TVO_1901940]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=337540 EQH33_RS08860 WP_000727277.1 1759712..1760749(-) (sepM) [Streptococcus pneumoniae strain TVO_1901940]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment