Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH35_RS09100 Genome accession   NZ_CP035245
Coordinates   1756769..1757806 (-) Length   345 a.a.
NCBI ID   WP_000727279.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901943     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1751769..1762806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH35_RS09075 (EQH35_09585) - 1752508..1753839 (-) 1332 WP_000390039.1 hemolysin family protein -
  EQH35_RS09080 (EQH35_09590) endA 1754130..1754954 (-) 825 WP_001036786.1 DNA-entry nuclease EndA Machinery gene
  EQH35_RS09085 (EQH35_09595) - 1754993..1755181 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  EQH35_RS09090 (EQH35_09600) murA 1755174..1756457 (-) 1284 WP_000358034.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH35_RS09095 (EQH35_09605) - 1756481..1756711 (-) 231 WP_001809307.1 DUF1146 family protein -
  EQH35_RS09100 (EQH35_09610) sepM 1756769..1757806 (-) 1038 WP_000727279.1 SepM family pheromone-processing serine protease Regulator
  EQH35_RS09105 (EQH35_09615) coaD 1757790..1758278 (-) 489 WP_001280736.1 pantetheine-phosphate adenylyltransferase -
  EQH35_RS09110 (EQH35_09620) rsmD 1758268..1758807 (-) 540 WP_000706951.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH35_RS09115 (EQH35_09625) asnA 1758872..1759864 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH35_RS09120 (EQH35_09635) - 1759976..1760659 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  EQH35_RS09125 (EQH35_09640) - 1760715..1761455 (-) 741 WP_000152680.1 RNA methyltransferase -
  EQH35_RS09130 (EQH35_09645) - 1761489..1761767 (+) 279 WP_001174613.1 acylphosphatase -
  EQH35_RS09135 (EQH35_09650) yidC 1761845..1762771 (+) 927 WP_000835949.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37565.63 Da        Isoelectric Point: 5.0724

>NTDB_id=337383 EQH35_RS09100 WP_000727279.1 1756769..1757806(-) (sepM) [Streptococcus pneumoniae strain TVO_1901943]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDVKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=337383 EQH35_RS09100 WP_000727279.1 1756769..1757806(-) (sepM) [Streptococcus pneumoniae strain TVO_1901943]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCACAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGAAAAAATGGGATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGTGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588


Multiple sequence alignment