Detailed information NTG0337353

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: BSR23_RS10670
• Genome accession: NZ_CP043421
• Coordinates: 2047512..2048492 (+)
• Length: 326 a.a.
• NCBI ID: WP_005454798.1
• Uniprot ID: Q87Q07
• Organism: Vibrio parahaemolyticus strain MVP1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2042512..2053492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR23_RS10650 (BSR23_010650)	-	2042869..2044479 (+)	1611	WP_077672934.1	peptide ABC transporter substrate-binding protein	-
BSR23_RS10655 (BSR23_010655)	oppB	2044646..2045566 (+)	921	WP_017448601.1	oligopeptide ABC transporter permease OppB	-
BSR23_RS10660 (BSR23_010660)	-	2045576..2046508 (+)	933	WP_015296632.1	ABC transporter permease subunit	-
BSR23_RS10665 (BSR23_010665)	-	2046519..2047502 (+)	984	WP_176092046.1	ABC transporter ATP-binding protein	-
BSR23_RS10670 (BSR23_010670)	amiE	2047512..2048492 (+)	981	WP_005454798.1	ABC transporter ATP-binding protein	Regulator
BSR23_RS10675 (BSR23_010675)	-	2048502..2050298 (+)	1797	WP_077672933.1	aminopeptidase P family protein	-
BSR23_RS10685 (BSR23_010685)	-	2050549..2052993 (-)	2445	WP_077672932.1	collagenase	-

Sequence

Protein

• Length: 326 a.a.
• Molecular weight: 36406.21 Da
• Isoelectric Point: 8.3113

>NTDB_id=337353 BSR23_RS10670 WP_005454798.1 2047512..2048492(+) (amiE) [Vibrio parahaemolyticus strain MVP1]
MNQKEVLLSARDLQVHFPVSRHLIPSRRKIVQAVNGIDLDVYRGETLGIVGESGCGKSTLARALLRLVEPTHGKLTWKGE
DMRGFSKNKLARRRQEFQMIFQDPSASLNPRLTISECIAEPLLTHQPQLKRAEVEKRVIAMMDKVGLLASQRNRYPHEFS
GGQCQRVGIARALILNPDLVVCDEPVSALDVSIQAQVINLLDDLKQEMGLTLVMIAHDLSVVRHISDRVMVMYLGKPMEV
GRYDQVFDDAQHPYTKALLSAVPIANPQLARNRDIQLLPGDLPSPLNPPSGCVFRTRCPEATELCGQQSPVKTGTEQHHI
YCSNMI

Nucleotide

• Length: 981 bp

>NTDB_id=337353 BSR23_RS10670 WP_005454798.1 2047512..2048492(+) (amiE) [Vibrio parahaemolyticus strain MVP1]
ATGAATCAGAAAGAAGTGTTATTGTCCGCTCGCGATCTGCAAGTGCATTTTCCTGTTTCGAGACACCTCATTCCGAGCCG
AAGAAAGATCGTACAAGCCGTCAACGGCATCGATTTGGATGTTTATCGAGGCGAAACGCTTGGCATTGTTGGCGAATCAG
GCTGCGGAAAATCCACCTTAGCGCGTGCTCTGCTGCGCTTAGTTGAACCCACGCACGGCAAGCTCACTTGGAAAGGTGAA
GACATGCGTGGCTTCAGCAAAAACAAGTTAGCGCGTCGTCGCCAAGAATTTCAGATGATATTCCAAGACCCATCGGCGAG
CCTCAATCCGAGATTGACGATTTCAGAATGTATCGCAGAGCCGTTACTCACACACCAACCTCAACTCAAACGCGCCGAAG
TCGAAAAACGCGTCATTGCAATGATGGACAAAGTGGGTCTGTTGGCAAGCCAACGTAACCGATATCCGCATGAGTTTTCT
GGCGGTCAGTGCCAACGTGTTGGCATCGCGCGCGCCTTAATCCTCAATCCGGACTTAGTGGTGTGTGATGAACCCGTCAG
CGCATTGGATGTTTCGATTCAAGCTCAGGTCATTAATTTGCTCGACGACCTCAAACAAGAAATGGGACTGACACTGGTGA
TGATCGCTCATGACCTAAGCGTTGTGCGCCATATCAGCGACCGAGTGATGGTGATGTACCTTGGCAAACCAATGGAAGTG
GGACGCTACGACCAAGTGTTCGACGATGCTCAGCATCCCTACACAAAAGCATTGCTTTCTGCGGTACCGATTGCCAATCC
GCAACTTGCACGCAACCGCGACATCCAATTGTTGCCCGGAGACCTCCCTTCTCCGCTCAACCCACCCAGCGGTTGTGTTT
TTAGAACCCGATGCCCAGAAGCTACGGAACTATGTGGGCAGCAAAGCCCAGTCAAAACAGGCACTGAGCAACATCATATT
TACTGTTCAAACATGATTTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (238-305)

• ABC transporter (ABC_tran) (35-186)

3D structure

• AlphaFold DB: Q87Q07

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	40.514	95.399	0.386
amiE	Streptococcus thermophilus LMD-9	40.514	95.399	0.386
amiF	Streptococcus salivarius strain HSISS4	45.455	84.356	0.383
amiE	Streptococcus salivarius strain HSISS4	39.744	95.706	0.38
amiF	Streptococcus thermophilus LMG 18311	45.421	83.742	0.38
amiF	Streptococcus thermophilus LMD-9	45.055	83.742	0.377
oppD	Streptococcus mutans UA159	38.339	96.012	0.368