Detailed information NTG0337328

Bioinformatically predicted

Overview

• Name: comE
• Type: Regulator
• Locus tag: EQH36_RS10740
• Genome accession: NZ_CP035244
• Coordinates: 2093305..2094057 (-)
• Length: 250 a.a.
• NCBI ID: WP_000866065.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901945
• Function: activate transcription of early competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 2088305..2099057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH36_RS11020 (EQH36_11240)	-	2090743..2092392 (-)	1650	Protein_2103	YhgE/Pip family protein	-
EQH36_RS10725 (EQH36_11245)	-	2092520..2093062 (+)	543	WP_001158266.1	TetR/AcrR family transcriptional regulator	-
EQH36_RS10740 (EQH36_11260)	comE	2093305..2094057 (-)	753	WP_000866065.1	competence system response regulator transcription factor ComE	Regulator
EQH36_RS10745 (EQH36_11265)	comD/comD1	2094054..2095379 (-)	1326	WP_001853914.1	competence system sensor histidine kinase ComD	Regulator
EQH36_RS10750 (EQH36_11270)	comC/comC1	2095400..2095525 (-)	126	WP_000799689.1	competence-stimulating peptide ComC	Regulator
EQH36_RS10760 (EQH36_11280)	rlmH	2095808..2096287 (-)	480	WP_000695930.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	-
EQH36_RS10765 (EQH36_11285)	htrA	2096470..2097651 (+)	1182	WP_000681597.1	S1C family serine protease	Regulator
EQH36_RS10770 (EQH36_11290)	spo0J	2097709..2098467 (+)	759	WP_000410380.1	ParB/RepB/Spo0J family partition protein	Regulator

Sequence

Protein

• Length: 250 a.a.
• Molecular weight: 29958.31 Da
• Isoelectric Point: 6.5073

>NTDB_id=337328 EQH36_RS10740 WP_000866065.1 2093305..2094057(-) (comE) [Streptococcus pneumoniae strain TVO_1901945]
MKVLILEDVIEHQVRLERILDEISKESNIPISYKTTGKVREFEEYIENDEVNQLYFLDIDIHGIEKKGFEVAQLIRHYNP
YAIIVFITSRSEFATLTYKYQVSALDFVDKDINDEMFKKRIEQNIFYTKSMLLENEDVVDYFDYNYKGNDLKIPYHDILY
IETTGVSHKLRIIGKNFAKEFYGTMTDIQEKDKHTQRFYSPHKSFLVNIGNIREIDRKNLEIVFYEDHRCPISRLKIRKL
KDILEKKSQK

Nucleotide

• Length: 753 bp

>NTDB_id=337328 EQH36_RS10740 WP_000866065.1 2093305..2094057(-) (comE) [Streptococcus pneumoniae strain TVO_1901945]
ATGAAAGTTTTAATTTTAGAAGATGTTATTGAACATCAAGTGAGACTAGAGAGAATATTGGATGAAATTTCGAAAGAATC
GAATATTCCAATATCATACAAGACAACGGGAAAAGTCCGTGAATTTGAAGAATACATTGAAAATGATGAAGTAAATCAGC
TTTATTTCCTAGATATCGATATTCATGGAATTGAGAAAAAGGGATTTGAAGTGGCTCAGCTCATTCGTCATTACAATCCT
TACGCTATTATCGTCTTTATCACTAGTCGATCAGAGTTTGCGACTCTAACCTATAAATACCAGGTATCAGCCCTAGATTT
TGTTGATAAGGATATCAATGATGAGATGTTTAAGAAGAGAATTGAGCAAAATATCTTCTACACGAAGAGTATGTTACTTG
AAAATGAAGATGTTGTAGATTATTTCGACTACAATTACAAGGGAAATGATTTAAAAATTCCTTACCATGATATTTTGTAT
ATTGAAACAACAGGGGTATCTCATAAATTGCGCATTATTGGTAAGAATTTTGCAAAAGAGTTTTATGGTACCATGACAGA
TATTCAGGAAAAGGACAAACATACTCAGCGATTTTATTCTCCTCACAAGTCATTTTTGGTAAATATAGGCAATATCAGAG
AAATTGATCGAAAAAACTTAGAAATTGTTTTCTATGAAGACCATCGTTGTCCTATTTCAAGATTAAAAATTAGAAAATTA
AAAGATATTTTAGAGAAAAAATCTCAAAAGTGA

Domains

Predicted by InterproScan.

• LytTr DNA-binding domain (LytTR) (151-244)

• Response regulator receiver domain (Response_reg) (3-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Streptococcus pneumoniae Rx1	100	100	1
comE	Streptococcus pneumoniae D39	100	100	1
comE	Streptococcus pneumoniae R6	100	100	1
comE	Streptococcus pneumoniae TIGR4	100	100	1
comE	Streptococcus mitis SK321	99.2	100	0.992
comE	Streptococcus mitis NCTC 12261	98.4	100	0.984
comE	Streptococcus infantis strain Atu-4	91.2	100	0.912
comE/comE2	Streptococcus gordonii strain NCTC7865	62.8	100	0.628
comE/comE1	Streptococcus gordonii str. Challis substr. CH1	62.8	100	0.628
comE/blpR	Streptococcus mutans UA159	41.296	98.8	0.408