Detailed information NTG0337240

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH37_RS09750
• Genome accession: NZ_CP035243
• Coordinates: 1929090..1929494 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588013.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901946
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1924090..1934494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH37_RS09715 (EQH37_10255)	rnpA	1924514..1924885 (-)	372	WP_000739244.1	ribonuclease P protein component	-
EQH37_RS10880	-	1924902..1925033 (-)	132	WP_000768904.1	hypothetical protein	-
EQH37_RS09720 (EQH37_10260)	-	1925034..1926224 (-)	1191	WP_000167756.1	acetate kinase	-
EQH37_RS09725 (EQH37_10265)	comYH	1926275..1927228 (-)	954	WP_061367493.1	class I SAM-dependent methyltransferase	Machinery gene
EQH37_RS09730	-	1927289..1927876 (-)	588	Protein_1917	class I SAM-dependent methyltransferase	-
EQH37_RS09735 (EQH37_10280)	comGG/cglG	1928013..1928423 (-)	411	WP_000265621.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH37_RS09740 (EQH37_10285)	comGF/cglF	1928401..1928862 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH37_RS09745 (EQH37_10290)	comGE/cglE	1928825..1929127 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH37_RS09750 (EQH37_10295)	comGD/cglD	1929090..1929494 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH37_RS09755 (EQH37_10300)	comGC/cglC	1929487..1929813 (-)	327	WP_000738629.1	comG operon protein ComGC	Machinery gene
EQH37_RS09760 (EQH37_10305)	comGB/cglB	1929815..1930831 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH37_RS09765 (EQH37_10310)	comGA/cglA/cilD	1930779..1931720 (-)	942	WP_000249548.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH37_RS09770 (EQH37_10315)	-	1931796..1932161 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH37_RS09775 (EQH37_10320)	-	1932312..1933370 (-)	1059	WP_050145166.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14665.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=337240 EQH37_RS09750 WP_000588013.1 1929090..1929494(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901946]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTNLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=337240 EQH37_RS09750 WP_000588013.1 1929090..1929494(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1901946]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAATCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47