Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EQH38_RS10740 Genome accession   NZ_CP035242
Coordinates   2125559..2126317 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain TVO_1901947     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2120559..2131317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH38_RS10710 (EQH38_11345) comE 2121156..2121908 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  EQH38_RS10715 (EQH38_11350) comD/comD2 2121905..2123230 (-) 1326 WP_000364845.1 competence system sensor histidine kinase ComD Regulator
  EQH38_RS10720 (EQH38_11355) comC/comC2 2123251..2123376 (-) 126 WP_000799686.1 competence-stimulating peptide ComC Regulator
  EQH38_RS10730 (EQH38_11365) rlmH 2123658..2124137 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EQH38_RS10735 (EQH38_11370) htrA 2124320..2125501 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  EQH38_RS10740 (EQH38_11375) spo0J 2125559..2126317 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=337178 EQH38_RS10740 WP_000410378.1 2125559..2126317(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901947]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=337178 EQH38_RS10740 WP_000410378.1 2125559..2126317(+) (spo0J) [Streptococcus pneumoniae strain TVO_1901947]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment