Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SOR_RS04810 Genome accession   NC_015291
Coordinates   959298..959762 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus oralis Uo5     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 954298..964762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS04785 (SOR_0979) - 956306..956704 (+) 399 Protein_899 hypothetical protein -
  SOR_RS04790 (SOR_0980) - 956736..957428 (+) 693 WP_001146408.1 YjjG family noncanonical pyrimidine nucleotidase -
  SOR_RS04795 (SOR_0981) - 957452..957745 (+) 294 WP_000448757.1 hypothetical protein -
  SOR_RS04800 (SOR_0982) - 957868..958623 (+) 756 WP_000089458.1 DUF4336 domain-containing protein -
  SOR_RS04805 (SOR_0983) - 958635..959288 (+) 654 WP_001164856.1 uracil-DNA glycosylase -
  SOR_RS04810 (SOR_0984) mutX 959298..959762 (+) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  SOR_RS04815 (SOR_0985) - 959775..961043 (+) 1269 WP_000960226.1 dihydroorotase -
  SOR_RS04820 (SOR_0986) - 961085..962425 (+) 1341 WP_000283622.1 MATE family efflux transporter -
  SOR_RS04825 (SOR_0987) - 962604..963572 (+) 969 WP_000105368.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  SOR_RS04830 (SOR_0988) - 963588..964580 (+) 993 WP_000448724.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=33717 SOR_RS04810 WP_001135768.1 959298..959762(+) (mutX) [Streptococcus oralis Uo5]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=33717 SOR_RS04810 WP_001135768.1 959298..959762(+) (mutX) [Streptococcus oralis Uo5]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTACTCATGCTCCATCGCAATAAGAAGCCCAATGA
TGTTCATGAAGGCAAATGGATTGGTGTGGGTGGTAAACTAGAGCGAGGGGAGACACCTCAGGAGTGCGCGGCGCGTGAAA
TCCTAGAAGAAACAGGCCTCAAAGCCAAGCCGGTTCTAAAAGGTGTTATCACTTTTCCAGAATTCACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTCGAGGGTGACTTGATTGACTGCAATGAGGGAACCTTAGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAGGGTGACCACACCTTTGTTGAGTGGCTTTTAGAAGATAAACCCTTCT
TTTCAGCTAAGTTTGTTTATGATGGGGATAAATTATTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987

Multiple sequence alignment