Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | FZN31_RS05955 | Genome accession | NZ_CP043414 |
| Coordinates | 1244689..1245204 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain EC42405 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1239689..1250204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZN31_RS05910 (FZN31_06045) | csrA | 1240275..1240460 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| FZN31_RS05940 (FZN31_06080) | yqaB | 1241919..1242485 (+) | 567 | WP_032184973.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| FZN31_RS05945 (FZN31_06085) | yqaA | 1242482..1242910 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| FZN31_RS05950 (FZN31_06090) | gshA | 1242983..1244539 (+) | 1557 | WP_000611789.1 | glutamate--cysteine ligase | - |
| FZN31_RS05955 (FZN31_06095) | luxS | 1244689..1245204 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| FZN31_RS05960 (FZN31_06100) | - | 1245249..1246361 (-) | 1113 | WP_105282297.1 | AAA family ATPase | - |
| FZN31_RS05965 (FZN31_06105) | - | 1246358..1247065 (-) | 708 | WP_088542227.1 | RNA ligase family protein | - |
| FZN31_RS05970 (FZN31_06110) | emrB | 1247323..1248861 (-) | 1539 | WP_012599898.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| FZN31_RS05975 (FZN31_06115) | emrA | 1248878..1250050 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=337004 FZN31_RS05955 WP_001130208.1 1244689..1245204(+) (luxS) [Escherichia coli strain EC42405]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=337004 FZN31_RS05955 WP_001130208.1 1244689..1245204(+) (luxS) [Escherichia coli strain EC42405]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTTGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGTACTTATCAGATGC
ATTCGTTGCAGGAAGCGCAGGATATTGCGCGTAATATCCTGGAACGTGACGTACGCATCAACAGCAACGAAGAGTTGGCG
CTGCCGAAAGAAAAGTTGCAGGAATTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTTGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGTACTTATCAGATGC
ATTCGTTGCAGGAAGCGCAGGATATTGCGCGTAATATCCTGGAACGTGACGTACGCATCAACAGCAACGAAGAGTTGGCG
CTGCCGAAAGAAAAGTTGCAGGAATTGCACATCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |