Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FZN32_RS11705 | Genome accession | NZ_CP043406 |
| Coordinates | 2361718..2362158 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain NMBU-W13E19 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2356718..2367158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZN32_RS11685 (FZN32_12010) | aroP | 2357716..2359089 (+) | 1374 | WP_000969912.1 | aromatic amino acid transporter AroP | - |
| FZN32_RS11690 (FZN32_12015) | ampE | 2359132..2359986 (-) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| FZN32_RS11695 (FZN32_12020) | ampD | 2359983..2360534 (-) | 552 | WP_000923726.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| FZN32_RS11700 (FZN32_12025) | nadC | 2360622..2361515 (+) | 894 | WP_001135167.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| FZN32_RS11705 (FZN32_12030) | pilA | 2361718..2362158 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| FZN32_RS11710 (FZN32_12035) | pilB | 2362168..2363553 (+) | 1386 | WP_001025168.1 | type II secretion system protein GspE | Machinery gene |
| FZN32_RS11715 (FZN32_12040) | hofC | 2363543..2364745 (+) | 1203 | WP_000157287.1 | protein transport protein HofC | - |
| FZN32_RS11720 (FZN32_12045) | guaC | 2364780..2365823 (-) | 1044 | WP_001217337.1 | GMP reductase | - |
| FZN32_RS26045 | - | 2365979..2366023 (-) | 45 | WP_120795372.1 | protein YacM | - |
| FZN32_RS11725 (FZN32_12050) | coaE | 2366048..2366668 (+) | 621 | WP_001269513.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=336925 FZN32_RS11705 WP_000360904.1 2361718..2362158(+) (pilA) [Escherichia coli strain NMBU-W13E19]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=336925 FZN32_RS11705 WP_000360904.1 2361718..2362158(+) (pilA) [Escherichia coli strain NMBU-W13E19]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |