Detailed information NTG0336895

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: FY406_RS10125
• Genome accession: NZ_CP043405
• Coordinates: 2043122..2045332 (-)
• Length: 736 a.a.
• NCBI ID: WP_003088809.1
• Uniprot ID: A0ABP2QYK4
• Organism: Streptococcus ratti strain ATCC 31377
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2038122..2050332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FY406_RS10100 (FY406_10100)	-	2038558..2039268 (-)	711	WP_003088805.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
FY406_RS10105 (FY406_10105)	-	2039258..2039959 (-)	702	WP_003088806.1	DnaD domain-containing protein	-
FY406_RS10110 (FY406_10110)	metA	2039969..2040913 (-)	945	WP_003088807.1	homoserine O-succinyltransferase	-
FY406_RS10115 (FY406_10115)	-	2041025..2041537 (-)	513	WP_003088808.1	adenine phosphoribosyltransferase	-
FY406_RS10120 (FY406_10120)	-	2041688..2042803 (-)	1116	WP_003086492.1	ISAs1 family transposase	-
FY406_RS10125 (FY406_10125)	recJ	2043122..2045332 (-)	2211	WP_003088809.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
FY406_RS10130 (FY406_10130)	-	2045329..2046093 (-)	765	WP_003088810.1	SDR family oxidoreductase	-
FY406_RS10135 (FY406_10135)	rnz	2046090..2047019 (-)	930	WP_003088811.1	ribonuclease Z	-
FY406_RS10140 (FY406_10140)	-	2047057..2047695 (-)	639	WP_003088812.1	hypothetical protein	-
FY406_RS10145 (FY406_10145)	hflX	2047679..2048926 (-)	1248	WP_003088813.1	GTPase HflX	-
FY406_RS10150 (FY406_10150)	miaA	2049150..2050037 (-)	888	WP_003088815.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
FY406_RS10155 (FY406_10155)	-	2050112..2050288 (+)	177	WP_002263068.1	DUF3042 family protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82339.39 Da
• Isoelectric Point: 4.6319

>NTDB_id=336895 FY406_RS10125 WP_003088809.1 2043122..2045332(-) (recJ) [Streptococcus ratti strain ATCC 31377]
MITSKFDWKIKQEKPDDGFFELIKKEKLSQAAAQILYGRGLNEASALEQFLHPDLSQLHDPYLLNDMEKAVKRIRQAIEN
YETILIYGDYDADGMTSSSIVKEALEMMGAECLVYLPNRFTDGYGPNQSVYRYFIEQQGVSLIVTVDNGVAGKEAIAYAQ
KEGVDVIVTDHHSLPQELPSAYAIVHPEHPDAAYPFKYLAGCGVAFKLACALLESVPVEMLDLVAIGTIADMVSLTDENR
IMVKYGLELLKQTERIGLQELLALSGVQADSISEETIGFKVAPQLNALGRLDDPNPAVELLTGFDEEEARTIAVMINDKN
EERKAIVQTIFDEAMAMVDTTKPAQVLAKEGWHAGVLGIVAGRIMEEINQPVIVLNIENGLAKGSARSLSTVNIFAALNE
HRDLFTAFGGHSGAAGMTLEADQLEKLEQVLVSYIEEHHIDLSQKNPLVIDAELPLSQLSFETVKGLEKLAPFGMDNDKP
VFLIKDFKVKQARIMGQNGAHLKLRLAQEASEFDLIAFNQGALLQEFQQAQNLELAVTISVNRWNGNTSLQLMLVDARVE
GIQLVDIRSRSSALPQTVPVLDGKTASKAVVLLEVPENEEDLLALFENRNFEVIYFKNIIKHRYYLTGYGTREQFAKLYK
TIYQFPEFDVRHKLKELSQFLNIPDILLVKMIQIFDELDFVTIDDGIMTVNKDAQKREISESHIYQDLKKLVKFQGLMAL
GTPQEIYDYLTSKNQK

Nucleotide

• Length: 2211 bp

>NTDB_id=336895 FY406_RS10125 WP_003088809.1 2043122..2045332(-) (recJ) [Streptococcus ratti strain ATCC 31377]
ATGATTACATCCAAATTTGATTGGAAAATAAAACAGGAAAAGCCAGATGATGGCTTTTTTGAGCTGATTAAAAAAGAAAA
GCTCAGTCAAGCGGCTGCCCAAATTCTCTATGGACGCGGCCTTAACGAAGCTAGTGCTCTCGAGCAGTTTTTGCATCCTG
ATTTGTCACAGCTTCATGATCCCTATCTTTTAAACGATATGGAAAAAGCGGTTAAGCGGATTCGTCAGGCCATTGAAAAC
TATGAAACTATTTTAATTTACGGCGATTATGATGCTGATGGTATGACATCCAGTTCTATTGTCAAAGAAGCGCTGGAGAT
GATGGGAGCAGAATGTCTGGTCTATCTTCCCAACCGTTTTACAGATGGTTATGGTCCAAACCAGAGTGTCTATCGGTATT
TTATTGAACAGCAGGGTGTGTCTTTGATTGTTACGGTAGATAATGGTGTTGCCGGCAAAGAGGCGATTGCCTATGCGCAG
AAAGAGGGCGTTGATGTCATTGTGACAGACCATCACAGCCTGCCCCAAGAACTGCCATCTGCTTATGCCATTGTTCACCC
TGAGCATCCTGATGCAGCCTATCCTTTTAAATATTTAGCCGGCTGCGGTGTTGCCTTTAAACTGGCCTGCGCTCTTTTAG
AGTCTGTTCCTGTGGAGATGCTGGATTTAGTAGCTATCGGAACGATTGCTGATATGGTTTCTCTGACAGATGAAAACCGT
ATCATGGTAAAATACGGCCTAGAACTGCTTAAGCAGACAGAGCGTATTGGCCTGCAGGAATTGCTGGCTCTCTCAGGCGT
TCAAGCAGACAGTATCAGCGAAGAGACCATCGGCTTCAAAGTGGCTCCGCAGCTCAATGCTTTAGGCCGCTTGGATGATC
CCAATCCTGCTGTAGAGCTATTGACAGGCTTTGATGAAGAAGAAGCCCGTACGATTGCGGTCATGATTAATGATAAAAAC
GAGGAACGCAAGGCCATTGTTCAGACAATTTTTGATGAGGCCATGGCCATGGTTGATACAACAAAACCTGCCCAGGTTCT
GGCCAAAGAAGGCTGGCATGCCGGCGTCTTGGGCATTGTCGCAGGACGTATTATGGAAGAAATTAACCAGCCGGTGATTG
TCCTCAATATTGAAAACGGCTTGGCTAAGGGGAGCGCCCGCAGCTTGAGCACGGTCAATATTTTTGCTGCTTTGAATGAG
CATAGAGACTTGTTTACGGCCTTTGGCGGACACAGCGGTGCGGCCGGTATGACTTTGGAAGCCGACCAGCTGGAAAAACT
TGAACAAGTCCTTGTATCCTATATTGAAGAGCACCATATTGACCTCTCTCAAAAGAATCCGCTGGTTATTGATGCTGAGC
TTCCTTTGTCACAGCTGAGCTTTGAAACCGTTAAAGGTTTGGAAAAACTGGCGCCCTTTGGCATGGACAATGATAAACCT
GTTTTTCTGATAAAGGATTTTAAGGTTAAACAGGCTAGGATCATGGGACAAAACGGTGCTCATCTCAAGCTTCGTCTTGC
TCAGGAAGCATCTGAATTTGATCTGATTGCTTTTAATCAGGGAGCTCTGCTTCAGGAATTTCAACAGGCTCAGAATCTAG
AATTGGCCGTGACCATATCTGTTAATCGGTGGAATGGCAATACCAGTCTTCAGCTTATGTTGGTAGATGCAAGGGTTGAG
GGCATCCAGCTGGTTGACATTCGCTCGCGCAGCAGCGCACTTCCTCAAACAGTGCCTGTTTTGGATGGTAAAACAGCCAG
CAAGGCCGTAGTCCTGCTGGAAGTTCCTGAAAATGAAGAAGATCTTCTAGCGCTTTTTGAAAATCGTAATTTTGAGGTTA
TTTACTTTAAAAATATCATCAAGCATCGTTATTATCTGACAGGTTACGGAACACGTGAGCAGTTTGCCAAGCTCTACAAG
ACAATTTATCAATTTCCAGAATTTGATGTGCGCCATAAATTAAAAGAGCTTAGCCAATTTCTAAACATTCCAGACATTTT
GCTGGTCAAGATGATTCAGATTTTTGATGAACTGGATTTTGTCACTATTGATGATGGGATCATGACAGTTAATAAGGATG
CGCAAAAACGGGAGATCTCTGAGAGTCATATCTATCAAGATTTGAAAAAACTTGTAAAATTTCAAGGGCTGATGGCCTTA
GGTACCCCGCAGGAAATCTATGATTACCTGACTTCGAAAAATCAAAAGTAA

Domains

Predicted by InterProScan.

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (584-724)

• DHHA1 domain (DHHA1) (319-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	65.359	100	0.656
recJ	Bacillus subtilis subsp. subtilis str. 168	37.275	100	0.394