Detailed information NTG0336881

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: EQH42_RS02580
• Genome accession: NZ_CP035238
• Coordinates: 519404..519670 (+)
• Length: 88 a.a.
• NCBI ID: WP_001819358.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_D39
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	518831..519133	519404..519670	flank	271

Gene organization within MGE regions

Location: 518831..519670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH42_RS02575 (EQH42_02730)	-	518831..519278 (+)	448	Protein_514	IS30 family transposase	-
EQH42_RS02580 (EQH42_02735)	HI0659	519404..519670 (+)	267	WP_001819358.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9667.20 Da
• Isoelectric Point: 4.6537

>NTDB_id=336881 EQH42_RS02580 WP_001819358.1 519404..519670(+) (HI0659) [Streptococcus pneumoniae strain TVO_D39]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=336881 EQH42_RS02580 WP_001819358.1 519404..519670(+) (HI0659) [Streptococcus pneumoniae strain TVO_D39]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	58.442	87.5	0.511