Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   FY406_RS06215 Genome accession   NZ_CP043405
Coordinates   1241238..1242044 (+) Length   268 a.a.
NCBI ID   WP_003087239.1    Uniprot ID   A0ABP2QWD0
Organism   Streptococcus ratti strain ATCC 31377     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1236238..1247044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FY406_RS06180 (FY406_06180) - 1236288..1237244 (+) 957 WP_003087222.1 branched-chain amino acid ABC transporter permease -
  FY406_RS06185 (FY406_06185) - 1237244..1238008 (+) 765 WP_003087227.1 ABC transporter ATP-binding protein -
  FY406_RS06190 (FY406_06190) - 1238008..1238718 (+) 711 WP_003087232.1 ABC transporter ATP-binding protein -
  FY406_RS06200 (FY406_06200) - 1238971..1239630 (+) 660 WP_003087234.1 CBS domain-containing protein -
  FY406_RS06205 (FY406_06205) tmk 1239714..1240352 (+) 639 WP_003087235.1 dTMP kinase -
  FY406_RS06210 (FY406_06210) - 1240366..1241241 (+) 876 WP_003087238.1 DNA polymerase III subunit delta' -
  FY406_RS06215 (FY406_06215) yaaT 1241238..1242044 (+) 807 WP_003087239.1 stage 0 sporulation family protein Regulator
  FY406_RS06220 (FY406_06220) yabA 1242037..1242369 (+) 333 WP_003087240.1 DNA replication initiation control protein YabA -
  FY406_RS06225 (FY406_06225) rsmI 1242375..1243241 (+) 867 WP_003087241.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  FY406_RS06230 (FY406_06230) - 1243605..1244840 (+) 1236 WP_003087242.1 ammonium transporter -
  FY406_RS06235 (FY406_06235) - 1244857..1245198 (+) 342 WP_003087243.1 P-II family nitrogen regulator -
  FY406_RS06240 (FY406_06240) serC 1245428..1246519 (+) 1092 WP_003087247.1 3-phosphoserine/phosphohydroxythreonine transaminase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 30388.80 Da        Isoelectric Point: 5.4952

>NTDB_id=336865 FY406_RS06215 WP_003087239.1 1241238..1242044(+) (yaaT) [Streptococcus ratti strain ATCC 31377]
MIEVIAIKYEKAGRINYVLPDQTYQEEDFLIVKKHKGNHLAQVVRANFDISADKLPDTEQMDRAVRRAEAADIEAYHNNL
RLAEDSFPKVRELIQKNQLEMKLIDIVFPLEREQVLITFVAEHRVDFRQLLKDLANLFKARIELRQINSREESKVYGGLG
PCGRALCCSSFLGEFPPVSIKMAKNQNLSLNSGKTTGICGRLMCCLSFEDDFYRESKEKFPDLGASVETQNGQGVVAGID
VISETVKVRFDENPSLLTYALEEVRVNG

Nucleotide


Download         Length: 807 bp        

>NTDB_id=336865 FY406_RS06215 WP_003087239.1 1241238..1242044(+) (yaaT) [Streptococcus ratti strain ATCC 31377]
ATGATAGAAGTAATTGCTATTAAATATGAAAAAGCAGGCCGTATCAATTATGTACTGCCTGATCAAACCTATCAAGAAGA
AGATTTTCTCATTGTCAAAAAACATAAGGGCAACCACTTAGCTCAAGTTGTTCGGGCTAATTTTGACATATCTGCCGATA
AGCTGCCTGACACTGAACAGATGGACAGAGCTGTAAGAAGAGCAGAAGCTGCTGATATTGAGGCTTATCATAATAATTTG
AGATTGGCAGAAGACAGTTTTCCTAAAGTCAGGGAGCTCATTCAAAAAAATCAGCTTGAGATGAAACTGATTGACATTGT
CTTTCCTTTGGAGCGTGAACAGGTTCTTATTACCTTTGTCGCGGAGCACCGTGTTGATTTTAGGCAGCTTTTGAAAGATT
TGGCCAATCTTTTTAAGGCTCGGATTGAGCTGCGTCAGATTAACAGCCGTGAAGAAAGCAAGGTTTATGGCGGATTAGGT
CCTTGCGGCAGGGCTCTTTGCTGCTCGAGCTTCTTGGGTGAATTTCCGCCGGTATCGATTAAAATGGCTAAAAATCAAAA
TCTGTCTTTGAACTCCGGCAAAACAACTGGAATTTGCGGCCGTTTAATGTGCTGCCTAAGTTTTGAGGATGATTTTTACA
GAGAATCTAAGGAAAAATTCCCAGATTTGGGAGCTAGTGTAGAGACCCAAAACGGTCAGGGTGTTGTTGCAGGAATTGAT
GTGATTTCAGAAACGGTCAAGGTGCGTTTTGATGAAAATCCTAGCCTTTTGACCTATGCTTTAGAGGAGGTTAGGGTCAA
TGGATAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(65-147)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.751

100

0.429

Multiple sequence alignment