Detailed information NTG0336775

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EQH44_RS09620
• Genome accession: NZ_CP035236
• Coordinates: 1889821..1890225 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588024.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902282
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1884821..1895225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH44_RS09585 (EQH44_10120)	rnpA	1885228..1885599 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EQH44_RS10760	-	1885616..1885747 (-)	132	WP_000768904.1	hypothetical protein	-
EQH44_RS09590 (EQH44_10125)	-	1885748..1886938 (-)	1191	WP_000167766.1	acetate kinase	-
EQH44_RS09595 (EQH44_10130)	comYH	1886989..1887942 (-)	954	WP_000345133.1	class I SAM-dependent methyltransferase	Machinery gene
EQH44_RS09600 (EQH44_10135)	-	1888003..1888604 (-)	602	Protein_1896	class I SAM-dependent methyltransferase	-
EQH44_RS09605 (EQH44_10140)	comGG/cglG	1888741..1889154 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH44_RS09610 (EQH44_10145)	comGF/cglF	1889132..1889593 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH44_RS09615 (EQH44_10150)	comGE/cglE	1889556..1889858 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH44_RS09620 (EQH44_10155)	comGD/cglD	1889821..1890225 (-)	405	WP_000588024.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH44_RS09625 (EQH44_10160)	comGC/cglC	1890218..1890544 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
EQH44_RS09630 (EQH44_10165)	comGB/cglB	1890546..1891562 (-)	1017	WP_078132591.1	competence type IV pilus assembly protein ComGB	Machinery gene
EQH44_RS09635 (EQH44_10170)	comGA/cglA/cilD	1891510..1892451 (-)	942	WP_000249573.1	competence type IV pilus ATPase ComGA	Machinery gene
EQH44_RS09640 (EQH44_10175)	-	1892527..1892892 (-)	366	WP_000286415.1	DUF1033 family protein	-
EQH44_RS09645 (EQH44_10180)	-	1893043..1894101 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14666.79 Da
• Isoelectric Point: 10.0319

>NTDB_id=336775 EQH44_RS09620 WP_000588024.1 1889821..1890225(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902282]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNSDGQTISNGSQKLPV
PKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=336775 EQH44_RS09620 WP_000588024.1 1889821..1890225(-) (comGD/cglD) [Streptococcus pneumoniae strain TVO_1902282]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTCAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGATCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.843	94.776	0.567
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47