Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EQH44_RS09155 Genome accession   NZ_CP035236
Coordinates   1813397..1814434 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain TVO_1902282     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1808397..1819434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH44_RS09130 (EQH44_09655) - 1809198..1810529 (-) 1332 WP_000390047.1 hemolysin family protein -
  EQH44_RS09135 (EQH44_09660) endA 1810758..1811582 (-) 825 WP_001036779.1 DNA-entry nuclease EndA Machinery gene
  EQH44_RS09140 (EQH44_09665) - 1811621..1811809 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  EQH44_RS09145 (EQH44_09670) murA 1811802..1813085 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EQH44_RS09150 (EQH44_09675) - 1813109..1813339 (-) 231 WP_000250384.1 DUF1146 family protein -
  EQH44_RS09155 (EQH44_09680) sepM 1813397..1814434 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EQH44_RS09160 (EQH44_09685) coaD 1814418..1814906 (-) 489 WP_001280742.1 pantetheine-phosphate adenylyltransferase -
  EQH44_RS09165 (EQH44_09690) rsmD 1814896..1815435 (-) 540 WP_000706962.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EQH44_RS09170 (EQH44_09695) asnA 1815500..1816492 (-) 993 WP_000747993.1 aspartate--ammonia ligase -
  EQH44_RS09175 (EQH44_09705) - 1816603..1817286 (-) 684 WP_001016916.1 Bax inhibitor-1/YccA family protein -
  EQH44_RS09180 (EQH44_09710) - 1817342..1818082 (-) 741 WP_000152702.1 RNA methyltransferase -
  EQH44_RS09185 (EQH44_09715) - 1818116..1818394 (+) 279 WP_001174613.1 acylphosphatase -
  EQH44_RS09190 (EQH44_09720) yidC 1818472..1819398 (+) 927 WP_000835948.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=336767 EQH44_RS09155 WP_000727277.1 1813397..1814434(-) (sepM) [Streptococcus pneumoniae strain TVO_1902282]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=336767 EQH44_RS09155 WP_000727277.1 1813397..1814434(-) (sepM) [Streptococcus pneumoniae strain TVO_1902282]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAAATCATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment