Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EQH45_RS11025 Genome accession   NZ_CP035235
Coordinates   2149875..2150633 (+) Length   252 a.a.
NCBI ID   WP_000410380.1    Uniprot ID   A0A6G2D2R9
Organism   Streptococcus pneumoniae strain TVO_1902276     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2144875..2155633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH45_RS10995 (EQH45_11530) comE 2145471..2146223 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  EQH45_RS11000 (EQH45_11535) comD/comD1 2146220..2147545 (-) 1326 WP_001853914.1 competence system sensor histidine kinase ComD Regulator
  EQH45_RS11005 (EQH45_11540) comC/comC1 2147566..2147691 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  EQH45_RS11015 (EQH45_11550) rlmH 2147974..2148453 (-) 480 WP_000695930.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EQH45_RS11020 (EQH45_11555) htrA 2148636..2149817 (+) 1182 WP_000681597.1 S1C family serine protease Regulator
  EQH45_RS11025 (EQH45_11560) spo0J 2149875..2150633 (+) 759 WP_000410380.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29179.54 Da        Isoelectric Point: 9.0305

>NTDB_id=336716 EQH45_RS11025 WP_000410380.1 2149875..2150633(+) (spo0J) [Streptococcus pneumoniae strain TVO_1902276]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNYFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=336716 EQH45_RS11025 WP_000410380.1 2149875..2150633(+) (spo0J) [Streptococcus pneumoniae strain TVO_1902276]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATTATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G2D2R9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment