Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EQZ20_RS14470 Genome accession   NZ_CP035232
Coordinates   2814140..2814940 (-) Length   266 a.a.
NCBI ID   WP_046131871.1    Uniprot ID   A0AAJ3Z019
Organism   Bacillus glycinifermentans strain SRCM103574     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2809140..2819940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ20_RS14455 (EQZ20_14455) - 2811146..2811400 (+) 255 WP_046131867.1 DUF2627 domain-containing protein -
  EQZ20_RS14460 (EQZ20_14460) - 2811435..2812160 (-) 726 WP_046131868.1 glycerophosphodiester phosphodiesterase -
  EQZ20_RS14465 (EQZ20_14465) - 2812500..2813414 (+) 915 WP_046131869.1 class I SAM-dependent methyltransferase -
  EQZ20_RS14470 (EQZ20_14470) spo0A 2814140..2814940 (-) 801 WP_046131871.1 sporulation transcription factor Spo0A Regulator
  EQZ20_RS14475 (EQZ20_14475) spoIVB 2815230..2816546 (-) 1317 WP_046131872.1 SpoIVB peptidase -
  EQZ20_RS14480 (EQZ20_14480) recN 2816717..2818447 (-) 1731 WP_046131873.1 DNA repair protein RecN Machinery gene
  EQZ20_RS14485 (EQZ20_14485) argR 2818478..2818927 (-) 450 WP_046131874.1 transcriptional regulator ArgR -
  EQZ20_RS14490 (EQZ20_14490) - 2819034..2819879 (-) 846 WP_046131875.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29566.11 Da        Isoelectric Point: 6.6109

>NTDB_id=336529 EQZ20_RS14470 WP_046131871.1 2814140..2814940(-) (spo0A) [Bacillus glycinifermentans strain SRCM103574]
MEKIKVCVADDNRELVGLLSEYIEGQNDMEVIGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDIENLVGHIRQVSGNGSQMTHRAPSVQSSVLRPQPESPKKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=336529 EQZ20_RS14470 WP_046131871.1 2814140..2814940(-) (spo0A) [Bacillus glycinifermentans strain SRCM103574]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGTGAATATATCGAGGGTCAAAA
CGACATGGAAGTGATCGGCGTGGCATATAACGGACAGGAATGTCTTTCTCTGTTTAAAGACAAGGAGCCTGACGTACTCG
TACTGGATATTATCATGCCTCATCTAGACGGATTGGCCGTTTTGGAAAGGCTGCGGGAATCTCAGCTTAAAAAACAGCCG
AACGTCATTATGCTGACTGCTTTCGGTCAGGAAGACGTAACGAAAAAAGCCGTGGATTTAGGCGCATCGTACTTCATTCT
GAAGCCGTTTGATATAGAAAATCTCGTCGGTCACATCCGCCAAGTCAGCGGAAACGGTTCTCAAATGACACACCGCGCCC
CTTCGGTTCAAAGCAGCGTCCTCCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGAGCATCATC
CACGAAATCGGCGTTCCCGCCCATATTAAAGGGTACCTATACTTGAGAGAAGCCATCTCCATGGTGTATAACGATATTGA
ACTGCTCGGAAGCATTACAAAAGTGCTGTATCCGGACATCGCCAAAAAATTCAACACGACCGCAAGCCGGGTCGAACGGG
CGATCCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCCATTTCTTCTCTGTTCGGCTACACCGTCAGC
ATGTCAAAAGCAAAGCCGACGAACAGCGAATTCATCGCGATGGTCGCAGATAAGCTGCGGTTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.509

100

0.929

Multiple sequence alignment