Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EQZ20_RS06570 Genome accession   NZ_CP035232
Coordinates   1310602..1310790 (+) Length   62 a.a.
NCBI ID   WP_046131321.1    Uniprot ID   A0AAE2EN46
Organism   Bacillus glycinifermentans strain SRCM103574     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1305602..1315790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ20_RS06540 (EQZ20_06540) argF 1306469..1307407 (+) 939 WP_046131235.1 ornithine carbamoyltransferase -
  EQZ20_RS06545 (EQZ20_06545) - 1307511..1307690 (+) 180 WP_046131234.1 YjzC family protein -
  EQZ20_RS06550 (EQZ20_06550) - 1307724..1307909 (-) 186 WP_046131233.1 YjzD family protein -
  EQZ20_RS06555 (EQZ20_06555) - 1308146..1308880 (+) 735 WP_046131232.1 hypothetical protein -
  EQZ20_RS06560 (EQZ20_06560) - 1308974..1309549 (+) 576 WP_046131231.1 hypothetical protein -
  EQZ20_RS06565 (EQZ20_06565) med 1309637..1310596 (+) 960 WP_046131230.1 BMP family ABC transporter substrate-binding protein Regulator
  EQZ20_RS06570 (EQZ20_06570) comZ 1310602..1310790 (+) 189 WP_046131321.1 ComZ family protein Regulator
  EQZ20_RS06575 (EQZ20_06575) - 1310835..1311092 (-) 258 WP_046131229.1 hypothetical protein -
  EQZ20_RS06580 (EQZ20_06580) - 1311260..1312198 (+) 939 WP_046131228.1 beta-ketoacyl-ACP synthase III -
  EQZ20_RS06585 (EQZ20_06585) fabF 1312220..1313458 (+) 1239 WP_046131227.1 beta-ketoacyl-ACP synthase II -
  EQZ20_RS06590 (EQZ20_06590) - 1313544..1314332 (+) 789 WP_046131226.1 DUF2268 domain-containing protein -
  EQZ20_RS06595 (EQZ20_06595) - 1314513..1315487 (+) 975 WP_046131225.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7059.15 Da        Isoelectric Point: 4.1652

>NTDB_id=336513 EQZ20_RS06570 WP_046131321.1 1310602..1310790(+) (comZ) [Bacillus glycinifermentans strain SRCM103574]
MQHEKSMEFLQIAMKYVPEAKEEMEKAGIELSPEMLQPFMTLFTKVMAEAYELGKADAGSDE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=336513 EQZ20_RS06570 WP_046131321.1 1310602..1310790(+) (comZ) [Bacillus glycinifermentans strain SRCM103574]
GTGCAGCACGAAAAATCGATGGAATTTCTGCAAATTGCCATGAAATACGTACCGGAAGCAAAAGAAGAGATGGAGAAAGC
GGGAATCGAGCTTTCGCCAGAGATGCTTCAGCCGTTTATGACATTGTTTACAAAGGTCATGGCAGAAGCATACGAGCTCG
GCAAAGCGGATGCAGGGTCAGACGAGTAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

78.689

98.387

0.774

Multiple sequence alignment