Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | EQZ20_RS06135 | Genome accession | NZ_CP035232 |
| Coordinates | 1218248..1218829 (+) | Length | 193 a.a. |
| NCBI ID | WP_046131313.1 | Uniprot ID | - |
| Organism | Bacillus glycinifermentans strain SRCM103574 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1213248..1223829
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQZ20_RS06115 (EQZ20_06115) | - | 1213482..1215011 (-) | 1530 | WP_046128883.1 | FAD-dependent oxidoreductase | - |
| EQZ20_RS06120 (EQZ20_06120) | - | 1215147..1216004 (+) | 858 | WP_046128882.1 | SDR family oxidoreductase | - |
| EQZ20_RS06125 (EQZ20_06125) | - | 1216086..1217641 (+) | 1556 | WP_231947364.1 | IS3 family transposase | - |
| EQZ20_RS06130 (EQZ20_06130) | - | 1217744..1217977 (-) | 234 | WP_046131314.1 | IDEAL domain-containing protein | - |
| EQZ20_RS06135 (EQZ20_06135) | comK | 1218248..1218829 (+) | 582 | WP_046131313.1 | competence protein ComK | Regulator |
| EQZ20_RS06140 (EQZ20_06140) | - | 1218823..1219188 (-) | 366 | WP_046131312.1 | hypothetical protein | - |
| EQZ20_RS06145 (EQZ20_06145) | - | 1219420..1220031 (+) | 612 | WP_046131310.1 | TVP38/TMEM64 family protein | - |
| EQZ20_RS06150 (EQZ20_06150) | lepB | 1220044..1220559 (+) | 516 | WP_046131309.1 | signal peptidase I | - |
| EQZ20_RS06155 (EQZ20_06155) | - | 1220618..1222501 (-) | 1884 | WP_065894726.1 | S8 family peptidase | - |
| EQZ20_RS25740 | - | 1222869..1223000 (+) | 132 | WP_269082044.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 22549.59 Da Isoelectric Point: 9.4685
>NTDB_id=336509 EQZ20_RS06135 WP_046131313.1 1218248..1218829(+) (comK) [Bacillus glycinifermentans strain SRCM103574]
MSNTEDLTRDSYEVNSSTMAVLPLDDGKTPASKVLETDRTFRVNMRPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPP
IMVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFRAAKYDNTFVTFVNGESLELPVSRASFENQVYRTAWLRTKFLDRIEG
NAAPKKQEFMLYPKEDRNQLIYEFILRELRKRY
MSNTEDLTRDSYEVNSSTMAVLPLDDGKTPASKVLETDRTFRVNMRPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPP
IMVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFRAAKYDNTFVTFVNGESLELPVSRASFENQVYRTAWLRTKFLDRIEG
NAAPKKQEFMLYPKEDRNQLIYEFILRELRKRY
Nucleotide
Download Length: 582 bp
>NTDB_id=336509 EQZ20_RS06135 WP_046131313.1 1218248..1218829(+) (comK) [Bacillus glycinifermentans strain SRCM103574]
ATGAGCAATACTGAAGATTTGACAAGAGATTCTTATGAAGTAAACAGTTCGACAATGGCAGTTCTGCCTCTTGATGATGG
AAAAACGCCCGCCTCAAAAGTGCTTGAAACCGACAGGACATTTCGGGTCAATATGAGACCTTTTCAAATCATAGAGAGAA
GCTGCCGCTATTTCGGTTCAAGCTATGCGGGGAGAAAGGCCGGCACGTACGAAGTCATTAAAGTTTCCCATAAGCCGCCG
ATCATGGTGGATCATTCAAACAATATTTTTCTTTTTCCCACATTCTCCTCTACAAGGCCTCAATGCGGGTGGCTTTCCCA
TGCGCATGTTCATGAATTCCGTGCGGCTAAGTATGACAATACATTCGTTACGTTCGTAAACGGTGAATCGCTGGAGCTGC
CGGTGTCCAGAGCATCTTTCGAAAATCAGGTTTACCGCACGGCATGGCTGAGAACGAAATTTCTCGACCGGATTGAAGGG
AACGCCGCGCCGAAAAAACAGGAATTTATGCTGTATCCGAAGGAGGATCGGAACCAGCTGATCTATGAATTCATCCTCAG
GGAGCTGAGAAAGCGCTATTGA
ATGAGCAATACTGAAGATTTGACAAGAGATTCTTATGAAGTAAACAGTTCGACAATGGCAGTTCTGCCTCTTGATGATGG
AAAAACGCCCGCCTCAAAAGTGCTTGAAACCGACAGGACATTTCGGGTCAATATGAGACCTTTTCAAATCATAGAGAGAA
GCTGCCGCTATTTCGGTTCAAGCTATGCGGGGAGAAAGGCCGGCACGTACGAAGTCATTAAAGTTTCCCATAAGCCGCCG
ATCATGGTGGATCATTCAAACAATATTTTTCTTTTTCCCACATTCTCCTCTACAAGGCCTCAATGCGGGTGGCTTTCCCA
TGCGCATGTTCATGAATTCCGTGCGGCTAAGTATGACAATACATTCGTTACGTTCGTAAACGGTGAATCGCTGGAGCTGC
CGGTGTCCAGAGCATCTTTCGAAAATCAGGTTTACCGCACGGCATGGCTGAGAACGAAATTTCTCGACCGGATTGAAGGG
AACGCCGCGCCGAAAAAACAGGAATTTATGCTGTATCCGAAGGAGGATCGGAACCAGCTGATCTATGAATTCATCCTCAG
GGAGCTGAGAAAGCGCTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
68.041 |
100 |
0.684 |