Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EQZ20_RS04880 Genome accession   NZ_CP035232
Coordinates   981447..982238 (+) Length   263 a.a.
NCBI ID   WP_046130993.1    Uniprot ID   A0AAE2JVU6
Organism   Bacillus glycinifermentans strain SRCM103574     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 976447..987238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ20_RS04855 (EQZ20_04855) - 978433..979320 (+) 888 WP_046130976.1 PhzF family phenazine biosynthesis isomerase -
  EQZ20_RS04860 (EQZ20_04860) - 979423..980007 (+) 585 WP_046130975.1 nitroreductase -
  EQZ20_RS04865 (EQZ20_04865) - 980046..980240 (-) 195 WP_046130974.1 YfhD family protein -
  EQZ20_RS04870 (EQZ20_04870) - 980312..980425 (-) 114 WP_082094105.1 YfhE family protein -
  EQZ20_RS04875 (EQZ20_04875) - 980490..981029 (-) 540 WP_046130973.1 GNAT family N-acetyltransferase -
  EQZ20_RS04880 (EQZ20_04880) recX 981447..982238 (+) 792 WP_046130993.1 recombination regulator RecX Regulator
  EQZ20_RS04885 (EQZ20_04885) - 982243..982557 (+) 315 WP_046130971.1 YfhH family protein -
  EQZ20_RS04890 (EQZ20_04890) - 982587..982757 (-) 171 WP_082094104.1 YpzG family protein -
  EQZ20_RS04895 (EQZ20_04895) - 982785..982934 (-) 150 WP_046130970.1 small, acid-soluble spore protein K -
  EQZ20_RS04900 (EQZ20_04900) - 983098..983346 (+) 249 WP_269082040.1 YfhJ family protein -
  EQZ20_RS04905 (EQZ20_04905) - 983385..984497 (+) 1113 WP_046130969.1 FAD-dependent oxidoreductase -
  EQZ20_RS04910 (EQZ20_04910) - 984689..985648 (+) 960 WP_046130968.1 glycosyltransferase family 2 protein -
  EQZ20_RS04915 (EQZ20_04915) - 985617..986018 (+) 402 WP_082094103.1 GtrA family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30503.87 Da        Isoelectric Point: 7.9823

>NTDB_id=336505 EQZ20_RS04880 WP_046130993.1 981447..982238(+) (recX) [Bacillus glycinifermentans strain SRCM103574]
MPYITKISAQKNNKDRVNIFLDEKYAFSVDMDVLVKFNLKKGKQLDELDVIEIQYGDDIKKGFNQALDYLSYRMRSIKEV
KDHLKKKGVADSAVTEIIHMLKSYKYVDDREFAAAYVSTHRKTSGKGPDVLYKELQLKGIDEELIKEALSSFTFSEQVTA
AVKHAEKVLKKGKKLSSKEMKQAIEQQLIRKGYSFDVINCALSETDYENDDDAEKEALYKHGEKAMRRYNYDGSYETKMK
VKQFLFRKGFPLDMIDQYLDEEG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=336505 EQZ20_RS04880 WP_046130993.1 981447..982238(+) (recX) [Bacillus glycinifermentans strain SRCM103574]
ATGCCGTATATTACAAAAATCTCCGCCCAGAAAAACAATAAAGACCGCGTCAATATTTTTCTGGACGAAAAATACGCGTT
CAGCGTTGACATGGATGTTCTCGTTAAGTTTAATCTGAAAAAGGGAAAACAGCTTGATGAGCTTGACGTCATCGAAATCC
AGTATGGCGATGATATTAAAAAAGGTTTTAATCAAGCGCTCGATTACCTTTCGTACAGAATGCGCTCAATAAAAGAAGTC
AAAGACCATTTAAAGAAAAAAGGCGTCGCAGATTCCGCAGTGACCGAGATCATTCATATGCTCAAAAGCTATAAATACGT
AGATGACCGGGAATTCGCGGCCGCTTATGTAAGCACTCACCGCAAAACGAGCGGCAAAGGCCCTGATGTTCTATATAAAG
AGCTGCAATTAAAAGGAATCGATGAAGAGCTGATCAAGGAGGCATTAAGCTCATTTACGTTTTCCGAACAAGTGACAGCC
GCTGTAAAACACGCTGAAAAAGTGCTGAAAAAGGGGAAAAAACTGTCTTCCAAAGAGATGAAACAAGCAATCGAACAGCA
GCTAATCCGAAAGGGATATTCATTCGATGTGATCAATTGCGCTCTTTCAGAAACAGACTATGAAAACGATGATGATGCGG
AAAAAGAAGCGCTGTACAAGCATGGGGAAAAAGCAATGAGACGCTACAATTACGACGGCTCGTACGAAACGAAAATGAAA
GTAAAACAATTTTTGTTTCGCAAAGGATTTCCGCTTGATATGATCGATCAATATTTAGACGAAGAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-205)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

69.084

99.62

0.688

Multiple sequence alignment