Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EQZ01_RS12765 | Genome accession | NZ_CP035231 |
| Coordinates | 2451372..2451707 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103571 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2446372..2456707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQZ01_RS12745 (EQZ01_12745) | gcvT | 2446964..2448052 (-) | 1089 | WP_004398598.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EQZ01_RS12750 (EQZ01_12750) | hepAA | 2448494..2450167 (+) | 1674 | WP_124058586.1 | SNF2-related protein | - |
| EQZ01_RS12755 (EQZ01_12755) | yqhG | 2450188..2450982 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| EQZ01_RS12760 (EQZ01_12760) | sinI | 2451165..2451338 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| EQZ01_RS12765 (EQZ01_12765) | sinR | 2451372..2451707 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| EQZ01_RS12770 (EQZ01_12770) | tasA | 2451800..2452585 (-) | 786 | WP_128738018.1 | biofilm matrix protein TasA | - |
| EQZ01_RS12775 (EQZ01_12775) | sipW | 2452649..2453221 (-) | 573 | WP_128738626.1 | signal peptidase I SipW | - |
| EQZ01_RS12780 (EQZ01_12780) | tapA | 2453205..2453966 (-) | 762 | WP_101169542.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQZ01_RS12785 (EQZ01_12785) | yqzG | 2454239..2454565 (+) | 327 | WP_024573388.1 | YqzG/YhdC family protein | - |
| EQZ01_RS12790 (EQZ01_12790) | spoIITA | 2454607..2454786 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQZ01_RS12795 (EQZ01_12795) | comGG | 2454857..2455231 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| EQZ01_RS12800 (EQZ01_12800) | comGF | 2455232..2455615 (-) | 384 | WP_128738019.1 | ComG operon protein ComGF | Machinery gene |
| EQZ01_RS12805 (EQZ01_12805) | comGE | 2455641..2455988 (-) | 348 | WP_128738020.1 | ComG operon protein 5 | Machinery gene |
| EQZ01_RS12810 (EQZ01_12810) | comGD | 2455972..2456403 (-) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| EQZ01_RS12815 (EQZ01_12815) | comGC | 2456393..2456689 (-) | 297 | WP_024573391.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=336458 EQZ01_RS12765 WP_003226345.1 2451372..2451707(+) (sinR) [Bacillus subtilis strain SRCM103571]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=336458 EQZ01_RS12765 WP_003226345.1 2451372..2451707(+) (sinR) [Bacillus subtilis strain SRCM103571]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
TCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
TCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |