Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EQZ01_RS08215 Genome accession   NZ_CP035231
Coordinates   1531318..1531893 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1526318..1536893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS08185 (EQZ01_08185) dapD 1526501..1527211 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  EQZ01_RS08190 (EQZ01_08190) dapI 1527281..1528405 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  EQZ01_RS08195 (EQZ01_08195) ykuS 1528467..1528712 (+) 246 WP_003232382.1 YkuS family protein -
  EQZ01_RS08200 (EQZ01_08200) mscT 1528749..1529552 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  EQZ01_RS08205 (EQZ01_08205) ahpA 1529789..1530331 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  EQZ01_RS08210 (EQZ01_08210) ykuV 1530402..1530848 (+) 447 WP_047182550.1 thiol-disulfide oxidoreductase YkuV -
  EQZ01_RS08215 (EQZ01_08215) rok 1531318..1531893 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  EQZ01_RS08220 (EQZ01_08220) cse15 1531934..1532899 (-) 966 WP_076457764.1 spore protein Cse15 -
  EQZ01_RS08225 (EQZ01_08225) mobA 1533036..1533635 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  EQZ01_RS08230 (EQZ01_08230) moeB 1533686..1534705 (+) 1020 WP_128737813.1 molybdopterin-synthase adenylyltransferase MoeB -
  EQZ01_RS08235 (EQZ01_08235) glp 1534723..1536015 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  EQZ01_RS08240 (EQZ01_08240) mobB 1535976..1536497 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=336448 EQZ01_RS08215 WP_003232378.1 1531318..1531893(+) (rok) [Bacillus subtilis strain SRCM103571]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=336448 EQZ01_RS08215 WP_003232378.1 1531318..1531893(+) (rok) [Bacillus subtilis strain SRCM103571]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment