Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   EQZ01_RS06740 Genome accession   NZ_CP035231
Coordinates   1269376..1270527 (+) Length   383 a.a.
NCBI ID   WP_128737747.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1264376..1275527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS06705 (EQZ01_06705) yjbB 1264836..1266053 (+) 1218 WP_128737746.1 MFS transporter -
  EQZ01_RS06710 (EQZ01_06710) yjbC 1266217..1266795 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  EQZ01_RS06715 (EQZ01_06715) spx 1266976..1267371 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  EQZ01_RS06720 (EQZ01_06720) yjbE 1267626..1268282 (-) 657 WP_003232944.1 TerC family protein -
  EQZ01_RS06725 (EQZ01_06725) - 1268452..1268592 (+) 141 WP_119122854.1 hypothetical protein -
  EQZ01_RS06730 (EQZ01_06730) mecA 1268559..1269215 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  EQZ01_RS06735 (EQZ01_06735) - 1269210..1269332 (-) 123 WP_003245684.1 hypothetical protein -
  EQZ01_RS06740 (EQZ01_06740) coiA 1269376..1270527 (+) 1152 WP_128737747.1 competence protein CoiA Machinery gene
  EQZ01_RS06745 (EQZ01_06745) pepF 1270757..1272586 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  EQZ01_RS06750 (EQZ01_06750) - 1272624..1272791 (-) 168 WP_003244944.1 hypothetical protein -
  EQZ01_RS06760 (EQZ01_06760) spxH 1273105..1274004 (-) 900 WP_128737748.1 protease adaptor protein SpxH -
  EQZ01_RS06765 (EQZ01_06765) bhbI 1274001..1274399 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  EQZ01_RS06770 (EQZ01_06770) cwlQ 1274654..1275388 (-) 735 WP_250629516.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44919.03 Da        Isoelectric Point: 9.8767

>NTDB_id=336443 EQZ01_RS06740 WP_128737747.1 1269376..1270527(+) (coiA) [Bacillus subtilis strain SRCM103571]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFISASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIVLRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=336443 EQZ01_RS06740 WP_128737747.1 1269376..1270527(+) (coiA) [Bacillus subtilis strain SRCM103571]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGTTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAGTGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAATCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGTACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTTA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.123

97.389

0.956


Multiple sequence alignment