Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   EQZ01_RS06620 Genome accession   NZ_CP035231
Coordinates   1246875..1247066 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103571     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1241875..1252066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS06590 (EQZ01_06590) argF 1242740..1243699 (+) 960 WP_077670615.1 ornithine carbamoyltransferase -
  EQZ01_RS06595 (EQZ01_06595) yjzC 1243785..1243964 (+) 180 WP_003245356.1 YjzC family protein -
  EQZ01_RS06600 (EQZ01_06600) yjzD 1244010..1244195 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  EQZ01_RS06605 (EQZ01_06605) - 1244443..1245177 (+) 735 WP_032721340.1 hypothetical protein -
  EQZ01_RS06610 (EQZ01_06610) - 1245259..1245816 (+) 558 WP_029317608.1 hypothetical protein -
  EQZ01_RS06615 (EQZ01_06615) med 1245907..1246860 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  EQZ01_RS06620 (EQZ01_06620) comZ 1246875..1247066 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  EQZ01_RS06625 (EQZ01_06625) yjzB 1247096..1247335 (-) 240 WP_003232972.1 spore coat protein YjzB -
  EQZ01_RS06630 (EQZ01_06630) fabH 1247500..1248438 (+) 939 WP_128737744.1 beta-ketoacyl-ACP synthase III -
  EQZ01_RS06635 (EQZ01_06635) fabF 1248461..1249702 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  EQZ01_RS06640 (EQZ01_06640) yjaZ 1249778..1250563 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  EQZ01_RS06645 (EQZ01_06645) appD 1250755..1251741 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=336439 EQZ01_RS06620 WP_003224559.1 1246875..1247066(+) (comZ) [Bacillus subtilis strain SRCM103571]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=336439 EQZ01_RS06620 WP_003224559.1 1246875..1247066(+) (comZ) [Bacillus subtilis strain SRCM103571]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment