Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EQY76_RS07780 Genome accession   NZ_CP035230
Coordinates   1465589..1466164 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103551     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1460589..1471164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS07750 (EQY76_07750) dapD 1460777..1461487 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  EQY76_RS07755 (EQY76_07755) dapI 1461557..1462681 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  EQY76_RS07760 (EQY76_07760) ykuS 1462743..1462988 (+) 246 WP_003232382.1 YkuS family protein -
  EQY76_RS07765 (EQY76_07765) mscT 1463025..1463828 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  EQY76_RS07770 (EQY76_07770) ahpA 1464065..1464607 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  EQY76_RS07775 (EQY76_07775) ykuV 1464677..1465123 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  EQY76_RS07780 (EQY76_07780) rok 1465589..1466164 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  EQY76_RS07785 (EQY76_07785) cse15 1466205..1467170 (-) 966 WP_024571970.1 spore protein Cse15 -
  EQY76_RS07790 (EQY76_07790) mobA 1467307..1467906 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  EQY76_RS07795 (EQY76_07795) moeB 1467957..1468976 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  EQY76_RS07800 (EQY76_07800) glp 1468994..1470286 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  EQY76_RS07805 (EQY76_07805) mobB 1470247..1470768 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=336369 EQY76_RS07780 WP_003232378.1 1465589..1466164(+) (rok) [Bacillus subtilis strain SRCM103551]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=336369 EQY76_RS07780 WP_003232378.1 1465589..1466164(+) (rok) [Bacillus subtilis strain SRCM103551]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment