Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   EQY76_RS01985 Genome accession   NZ_CP035230
Coordinates   363954..364352 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain SRCM103551     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 358954..369352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS01950 (EQY76_01950) - 359823..360018 (+) 196 Protein_335 hypothetical protein -
  EQY76_RS01955 (EQY76_01955) - 360058..360372 (+) 315 Protein_336 RDD family protein -
  EQY76_RS01960 (EQY76_01960) yckD 360454..360786 (+) 333 WP_015252849.1 YckD family protein -
  EQY76_RS01965 (EQY76_01965) - 360914..361336 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  EQY76_RS01970 (EQY76_01970) - 361324..361665 (+) 342 WP_032724911.1 DUF3147 family protein -
  EQY76_RS01975 (EQY76_01975) - 361684..362412 (+) 729 WP_046380777.1 AAA family ATPase -
  EQY76_RS01980 (EQY76_01980) bglC 362484..363917 (+) 1434 WP_046380778.1 6-phospho-beta-glucosidase -
  EQY76_RS01985 (EQY76_01985) nin/comJ 363954..364352 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  EQY76_RS01990 (EQY76_01990) nucA/comI 364379..364828 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  EQY76_RS01995 (EQY76_01995) tlpC 364996..366717 (-) 1722 WP_046380779.1 methyl-accepting chemotaxis protein TlpC -
  EQY76_RS02000 (EQY76_02000) hxlB 366828..367385 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  EQY76_RS02005 (EQY76_02005) hxlA 367391..368023 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  EQY76_RS02010 (EQY76_02010) hxlR 368252..368614 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=336340 EQY76_RS01985 WP_015715226.1 363954..364352(-) (nin/comJ) [Bacillus subtilis strain SRCM103551]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=336340 EQY76_RS01985 WP_015715226.1 363954..364352(-) (nin/comJ) [Bacillus subtilis strain SRCM103551]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment