Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FQP84_RS11740 Genome accession   NZ_CP043302
Coordinates   2246791..2247414 (-) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain 16445     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2241791..2252414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQP84_RS11715 (FQP84_11715) rpmG 2243367..2243516 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  FQP84_RS11720 (FQP84_11720) rpsN 2243970..2244239 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  FQP84_RS11725 (FQP84_11725) guaC 2244396..2245373 (+) 978 WP_000688126.1 GMP reductase -
  FQP84_RS11735 (FQP84_11735) - 2245395..2246411 (+) 1017 WP_001789887.1 CAP domain-containing protein -
  FQP84_RS11740 (FQP84_11740) dinR/lexA 2246791..2247414 (-) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  FQP84_RS11745 (FQP84_11745) sosA 2247557..2247790 (+) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  FQP84_RS11750 (FQP84_11750) - 2247926..2248165 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  FQP84_RS11755 (FQP84_11755) recP/tkt 2248286..2250274 (+) 1989 WP_000481443.1 transketolase Machinery gene
  FQP84_RS11760 (FQP84_11760) - 2250552..2250794 (+) 243 WP_000246909.1 YneF family protein -
  FQP84_RS11765 (FQP84_11765) - 2250781..2250879 (+) 99 WP_001789897.1 hypothetical protein -
  FQP84_RS11770 (FQP84_11770) - 2250973..2251440 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=336306 FQP84_RS11740 WP_001208760.1 2246791..2247414(-) (dinR/lexA) [Staphylococcus aureus strain 16445]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=336306 FQP84_RS11740 WP_001208760.1 2246791..2247414(-) (dinR/lexA) [Staphylococcus aureus strain 16445]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment