Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EQY74_RS14495 Genome accession   NZ_CP035228
Coordinates   2727565..2728365 (-) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103529     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2722565..2733365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY74_RS14460 (EQY74_14460) - 2723757..2724011 (+) 255 WP_003183348.1 DUF2627 domain-containing protein -
  EQY74_RS14465 (EQY74_14465) - 2724062..2724787 (-) 726 WP_003183351.1 glycerophosphodiester phosphodiesterase -
  EQY74_RS14470 (EQY74_14470) - 2724921..2725496 (-) 576 WP_225315880.1 N-acetylmuramoyl-L-alanine amidase -
  EQY74_RS14475 (EQY74_14475) - 2725577..2725897 (-) 321 WP_003183355.1 hypothetical protein -
  EQY74_RS24350 - 2725896..2726228 (+) 333 WP_229107141.1 hypothetical protein -
  EQY74_RS14485 (EQY74_14485) - 2726383..2726769 (-) 387 WP_009327922.1 serine acetyltransferase -
  EQY74_RS14490 (EQY74_14490) - 2726896..2727192 (-) 297 WP_003183359.1 antimicrobial peptide LCI -
  EQY74_RS14495 (EQY74_14495) spo0A 2727565..2728365 (-) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  EQY74_RS14500 (EQY74_14500) spoIVB 2728655..2729938 (-) 1284 WP_011198109.1 SpoIVB peptidase -
  EQY74_RS14505 (EQY74_14505) recN 2730121..2731851 (-) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  EQY74_RS14510 (EQY74_14510) argR 2731883..2732332 (-) 450 WP_003183369.1 transcriptional regulator ArgR -
  EQY74_RS14515 (EQY74_14515) - 2732498..2733343 (-) 846 WP_003183371.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=336299 EQY74_RS14495 WP_003183361.1 2727565..2728365(-) (spo0A) [Bacillus licheniformis strain SRCM103529]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=336299 EQY74_RS14495 WP_003183361.1 2727565..2728365(-) (spo0A) [Bacillus licheniformis strain SRCM103529]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment