Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   EQY74_RS06545 Genome accession   NZ_CP035228
Coordinates   1278305..1278475 (+) Length   56 a.a.
NCBI ID   WP_128739511.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103529     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1273305..1283475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY74_RS06515 (EQY74_06515) - 1274173..1274985 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  EQY74_RS06520 (EQY74_06520) - 1275167..1275346 (+) 180 WP_003180573.1 YjzC family protein -
  EQY74_RS06525 (EQY74_06525) - 1275417..1275611 (-) 195 WP_009328851.1 YjzD family protein -
  EQY74_RS24550 - 1275622..1275756 (-) 135 WP_016885913.1 hypothetical protein -
  EQY74_RS06530 (EQY74_06530) - 1275843..1276577 (+) 735 WP_009328850.1 hypothetical protein -
  EQY74_RS06535 (EQY74_06535) - 1276664..1277239 (+) 576 WP_016885912.1 hypothetical protein -
  EQY74_RS06540 (EQY74_06540) med 1277326..1278279 (+) 954 WP_009328848.1 BMP family ABC transporter substrate-binding protein Regulator
  EQY74_RS06545 (EQY74_06545) comZ 1278305..1278475 (+) 171 WP_128739511.1 ComZ family protein Regulator
  EQY74_RS06550 (EQY74_06550) - 1278527..1278766 (-) 240 WP_009328847.1 hypothetical protein -
  EQY74_RS06555 (EQY74_06555) - 1278936..1279874 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  EQY74_RS06560 (EQY74_06560) fabF 1279896..1281134 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  EQY74_RS06565 (EQY74_06565) - 1281222..1282010 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  EQY74_RS06570 (EQY74_06570) - 1282202..1283176 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6304.29 Da        Isoelectric Point: 3.9646

>NTDB_id=336278 EQY74_RS06545 WP_128739511.1 1278305..1278475(+) (comZ) [Bacillus licheniformis strain SRCM103529]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELSKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=336278 EQY74_RS06545 WP_128739511.1 1278305..1278475(+) (comZ) [Bacillus licheniformis strain SRCM103529]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCAGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.214

100

0.732

Multiple sequence alignment